RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 TMEM229AB2RXF0 380 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 H0YL77 283 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 NXPH3O95157 252 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 PPP1CCP36873 323 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 TCL1AP56279 114 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 TNFRSF9Q07011 255 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 SRSF4Q08170 494 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 FGFRL1Q8N441 504 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 FAM89BQ8N5H3 189 aa5.33□□□□□ -1.56
PRPF4B-205ENST00000480058 NDUFB4O95168 129 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 ZNF735P0CB33 412 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 KIR2DL2P43627 348 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 MGAT2Q10469 447 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 SRSF5Q13243 272 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 FHL5Q5TD97 284 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 TSPO2Q5TGU0 170 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 LRRC75AQ8NAA5 344 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 MBD3L1Q8WWY6 194 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 HARBI1Q96MB7 349 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 GSN-AS1Q9NRJ2 163 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 MRPL22Q9NWU5 206 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 TTC3P53804 2025 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 INTS1Q8N201 2190 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 AREGP15514 252 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 FGF8P55075 233 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 ADAD2Q8NCV1 583 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 MYH13Q9UKX3 1938 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 CDIPTO14735 213 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 ID3Q02535 119 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 WDR25Q64LD2 544 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 OR51G1Q8NGK1 321 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 PCGF1Q9BSM1 259 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 PARLQ9H300 379 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 LHX9Q9NQ69 397 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 G6PC2Q9NQR9 355 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 TBL2Q9Y4P3 447 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 TMEM56-RWDD3S4R434 201 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 DDX60Q8IY21 1712 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 USP54Q70EL1 1684 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 LOC105371267A0A1B0GV96 52 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 UBE2CO00762 179 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 PGLYRP1O75594 196 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 TNFSF15O95150 251 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 MT-CO3P00414 261 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 OSR1Q8TAX0 266 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 ZNF721Q8TF20 911 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 SDF2L1Q9HCN8 221 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 DNAJC4Q9NNZ3 241 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 GREM1O60565 184 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 MPZL1O95297 269 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 METAP1P53582 386 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 TCF23Q7RTU1 214 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 MOB3BQ86TA1 216 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 OR2Z1Q8NG97 314 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 ABHD3Q8WU67 409 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 DEFB127Q9H1M4 99 aa5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 MBD1Q9UIS9 605 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-205ENST00000480058 TCF21O43680 179 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 MLF1P58340 268 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 RUNX1Q01196 453 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 Q56UQ5 140 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 SLC23A3Q6PIS1 610 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 LINC00114Q6XXX2 140 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 FAM90A1Q86YD7 464 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 GPR146Q96CH1 333 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 TOGARAM1Q9Y4F4 1720 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 IGHV1OR15-9A0A0B4J2B8 117 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 C19orf67A6NJJ6 358 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 SLC17A3O00476 420 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 DLL1O00548 723 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 ZP1P60852 638 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 C9orf40Q8IXQ3 194 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 TTC9CQ8N5M4 171 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 WDYHV1Q96HA8 205 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 TCF19Q9Y242 345 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 ROS1P08922 2347 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 SHISA3A0PJX4 238 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 DPRXA6NFQ7 191 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 OR11H12B2RN74 326 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 RBP4P02753 201 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 IGKV3-11P04433 115 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 AMY1AP04745 511 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 RPL8P62917 257 aaKnown RBP5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 SRSF7Q16629 238 aaKnown RBP eCLIP5.31□□□□□ -1.561e-5■■■□□ 19.1
PRPF4B-205ENST00000480058 SAMD13Q5VXD3 122 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 OR11H1Q8NG94 326 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 OR11H2Q8NH07 326 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 MIEN1Q9BRT3 115 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 NWD2Q9ULI1 1742 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 ACACAQ13085 2346 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 A0A0J9YW62 118 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 CEACAM18A8MTB9 384 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 K7N7A8 449 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 NPIPB7O75200 414 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 ATP5LO75964 103 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 C1QL1O75973 258 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 CA2P00918 260 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 PSG2P11465 335 aa5.31□□□□□ -1.56
PRPF4B-205ENST00000480058 CRYBA2P53672 197 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms