RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 MPV17LQ2QL34 196 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 C6orf183Q5T699 404 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 ASCL4Q6XD76 172 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 MFSD4AQ8N468 514 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 PARP16Q8N5Y8 322 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 OR5T1Q8NG75 326 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 OR5D14Q8NGL3 314 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 GRPEL2Q8TAA5 225 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 C4orf36Q96KX1 117 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 PARP12Q9H0J9 701 aaKnown RBP7.28□□□□□ -1.24
GPNMB-211ENST00000479625 SLC2A8Q9NY64 477 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 METTL1Q9UBP6 276 aaKnown RBP7.28□□□□□ -1.24
GPNMB-211ENST00000479625 RNF150Q9ULK6 438 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 ING4Q9UNL4 249 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 H3BS24 57 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 RBMXL2O75526 392 aaKnown RBP7.27□□□□□ -1.25
GPNMB-211ENST00000479625 POLR2IP36954 125 aaKnown RBP7.27□□□□□ -1.25
GPNMB-211ENST00000479625 SOX2P48431 317 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 SSBP2P81877 361 aaPredicted RBP7.27□□□□□ -1.25
GPNMB-211ENST00000479625 GUCA2BQ16661 112 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 RPEL1Q2QD12 228 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 TMEM30BQ3MIR4 351 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 LGALS9CQ6DKI2 356 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 ZNF529Q6P280 563 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 LYG2Q86SG7 212 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 ARHGAP24Q8N264 748 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 STX19Q8N4C7 294 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 OR2K2Q8NGT1 345 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 MRPS24Q96EL2 167 aaKnown RBP7.27□□□□□ -1.25
GPNMB-211ENST00000479625 CPNE2Q96FN4 548 aaPredicted RBP7.27□□□□□ -1.25
GPNMB-211ENST00000479625 PDCD1LG2Q9BQ51 273 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 KRTAP4-5Q9BYR2 181 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 IFI27L2Q9H2X8 130 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 TAF9BQ9HBM6 251 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 ARGLU1Q9NWB6 273 aaPredicted RBP7.27□□□□□ -1.25
GPNMB-211ENST00000479625 IL36GQ9NZH8 169 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 RCC2Q9P258 522 aaKnown RBP7.27□□□□□ -1.25
GPNMB-211ENST00000479625 PEF1Q9UBV8 284 aaKnown RBP7.27□□□□□ -1.25
GPNMB-211ENST00000479625 JPT1Q9UK76 154 aa7.27□□□□□ -1.25
GPNMB-211ENST00000479625 KLK5Q9Y337 293 aaPredicted RBP7.27□□□□□ -1.25
GPNMB-211ENST00000479625 DAPL1A0PJW8 107 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 AQP12BA6NM10 295 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 H7C2Y5 167 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 J3QRE1 110 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 MAGEB3O15480 346 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 OR2A4O95047 310 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 RPL39P5Q59GN2 51 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 STEAP3Q658P3 488 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 LINC00596Q86U02 117 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 SPATA24Q86W54 205 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 LAX1Q8IWV1 398 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 AQP12AQ8IXF9 295 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 BVESQ8NE79 360 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 DYNLRB2Q8TF09 96 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 GGTLC1Q9BX51 225 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 METTL9Q9H1A3 318 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 ISG20L2Q9H9L3 353 aaKnown RBP7.26□□□□□ -1.25
GPNMB-211ENST00000479625 ZNF446Q9NWS9 450 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 HERC1Q15751 4861 aa7.26□□□□□ -1.25
GPNMB-211ENST00000479625 E9PI62 339 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 H0YJW9 148 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 FADS2O95864 444 aaKnown RBP7.25□□□□□ -1.25
GPNMB-211ENST00000479625 MAS1P04201 325 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 APELAP0DMC3 54 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 CT45A6P0DMU7 189 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 CT45A5P0DMU8 189 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 CT45A7P0DMV0 189 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 TNFRSF9Q07011 255 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 PSG5Q15238 335 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 MOGAT2Q3SYC2 334 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 SLC22A6Q4U2R8 563 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 DDI2Q5TDH0 399 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 DMKNQ6E0U4 476 aaPredicted RBP7.25□□□□□ -1.25
GPNMB-211ENST00000479625 RAB12Q6IQ22 244 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 ZNF343Q6P1L6 599 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 ZNF562Q6V9R5 426 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 GAPTQ8N292 157 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 OR2AK2Q8NG84 335 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 ORAI1Q96D31 301 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 NRBF2Q96F24 287 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 CIB1Q99828 191 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 JAM3Q9BX67 310 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 RAB9BQ9NP90 201 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 PEMTQ9UBM1 199 aa7.25□□□□□ -1.25
GPNMB-211ENST00000479625 A0A0G2JLM5 398 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 UBE2QL1A1L167 161 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 OR5H14A6NHG9 310 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 MSGN1A6NI15 193 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 MCRIP1C9JLW8 97 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 H3BNX3 289 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 H3BUA1 57 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 BMPR1BO00238 502 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 ZNF93P35789 620 aaPredicted RBP7.24□□□□□ -1.25
GPNMB-211ENST00000479625 LINC00205P59089 165 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 TMED1Q13445 227 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 FXYD3Q14802 87 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 TATDN3Q17R31 274 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 DEFB135Q30KP9 77 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 DEFB114Q30KQ6 69 aa7.24□□□□□ -1.25
GPNMB-211ENST00000479625 KDM4DQ6B0I6 523 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms