RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TAF15Q92804 592 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■■■□ 22
C9orf3-217ENST00000479161 S1PR3Q99500 378 aa12.35□□□□□ -0.43
C9orf3-217ENST00000479161 MOB4Q9Y3A3 225 aa12.35□□□□□ -0.43
C9orf3-217ENST00000479161 AMY1AP04745 511 aa12.34□□□□□ -0.43
C9orf3-217ENST00000479161 AMY2AP04746 511 aa12.34□□□□□ -0.43
C9orf3-217ENST00000479161 C5orf24Q7Z6I8 188 aa12.34□□□□□ -0.43
C9orf3-217ENST00000479161 MOB3BQ86TA1 216 aa12.34□□□□□ -0.43
C9orf3-217ENST00000479161 OR10J5Q8NHC4 309 aa12.34□□□□□ -0.43
C9orf3-217ENST00000479161 WIPF2Q8TF74 440 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-217ENST00000479161 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-217ENST00000479161 ZNF251Q9BRH9 671 aa12.34□□□□□ -0.43
C9orf3-217ENST00000479161 WNT10AQ9GZT5 417 aa12.34□□□□□ -0.43
C9orf3-217ENST00000479161 C11orf54Q9H0W9 315 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-217ENST00000479161 SERTAD4Q9NUC0 356 aa12.34□□□□□ -0.43
C9orf3-217ENST00000479161 A0A075B6Q4 140 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 SAA2-SAA4A0A096LPE2 208 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 TMEM235A6NFC5 223 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 TPPPO94811 219 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 MOSP00540 346 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 IGKV1D-33P01593 117 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 IGKV1-33P01594 117 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 APOA1P02647 267 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 GSTT2P0CG29 244 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 GSTT2BP0CG30 244 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 SAA2P0DJI9 122 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-217ENST00000479161 TMEM11P17152 192 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 CD24P25063 80 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 CBX5P45973 191 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 TMBIM6P55061 237 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 GNG2P59768 71 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 BLCAPP62952 87 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 LSAMPQ13449 338 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 GPR107Q5VW38 600 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 CNIH2Q6PI25 160 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 RAB2BQ8WUD1 216 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 AP3S1Q92572 193 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 NABP2Q9BQ15 211 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 AUNIPQ9H7T9 357 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 RDH8Q9NYR8 311 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 OR1A1Q9P1Q5 309 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 TRRAPQ9Y4A5 3859 aa12.33□□□□□ -0.44
C9orf3-217ENST00000479161 WNK1Q9H4A3 2382 aa12.32□□□□□ -0.44
C9orf3-217ENST00000479161 TRAV18A0A075B6X5 111 aa12.32□□□□□ -0.44
C9orf3-217ENST00000479161 SMIM31A0A1B0GVY4 71 aa12.32□□□□□ -0.44
C9orf3-217ENST00000479161 HAX1O00165 279 aa12.32□□□□□ -0.44
C9orf3-217ENST00000479161 MC5RP33032 325 aa12.32□□□□□ -0.44
C9orf3-217ENST00000479161 REG1BP48304 166 aa12.32□□□□□ -0.44
C9orf3-217ENST00000479161 C5orf56Q8N8D9 126 aa12.32□□□□□ -0.44
C9orf3-217ENST00000479161 RNF5Q99942 180 aa12.32□□□□□ -0.44
C9orf3-217ENST00000479161 PLSCR3Q9NRY6 295 aa12.32□□□□□ -0.44
C9orf3-217ENST00000479161 ZNF230Q9UIE0 474 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-217ENST00000479161 ELF5Q9UKW6 265 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-217ENST00000479161 OR5H14A6NHG9 310 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 SSX5O60225 188 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 ZNF182P17025 639 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-217ENST00000479161 TAGLNQ01995 201 aaKnown RBP12.31□□□□□ -0.44
C9orf3-217ENST00000479161 HES1Q14469 280 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 FBLN7Q53RD9 439 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 IGSF11Q5DX21 431 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 PRR31Q5SQ13 230 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 MZT2AQ6P582 158 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 H1FOOQ8IZA3 346 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-217ENST00000479161 SAMD12Q8N8I0 201 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 OR5AN1Q8NGI8 311 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 TSC22D3Q99576 134 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 NAA50Q9GZZ1 169 aaKnown RBP12.31□□□□□ -0.44
C9orf3-217ENST00000479161 LIN7CQ9NUP9 197 aaKnown RBP12.31□□□□□ -0.44
C9orf3-217ENST00000479161 ANXA10Q9UJ72 324 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 ZNF221Q9UK13 617 aa12.31□□□□□ -0.44
C9orf3-217ENST00000479161 MGAM2Q2M2H8 2515 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 ST8SIA5O15466 376 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 PROP1O75360 226 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 RBBP9O75884 186 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 SLC22A5O76082 557 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 KRTAP10-3P60369 221 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 ABCA11PQ4W5N1 156 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 HOGA1Q86XE5 327 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 NUDCD2Q8WVJ2 157 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 ST6GALNAC5Q9BVH7 336 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 PARP12Q9H0J9 701 aaKnown RBP12.3□□□□□ -0.44
C9orf3-217ENST00000479161 ZNF580Q9UK33 172 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 PKD1L1Q8TDX9 2849 aa12.3□□□□□ -0.44
C9orf3-217ENST00000479161 IGKV1D-8A0A087WSZ0 117 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 BET1O15155 118 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 IGHG2P01859 326 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 CT45A6P0DMU7 189 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 CT45A5P0DMU8 189 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 CT45A7P0DMV0 189 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 VDAC2P45880 294 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-217ENST00000479161 OR3A3P47888 321 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 TMEM69Q5SWH9 247 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 Q6ZS46 218 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 FAM71E2Q8N5Q1 922 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 KLHDC1Q8N7A1 406 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 Q8N9W7 124 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 NPBQ8NG41 125 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 ABHD14BQ96IU4 210 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 GINS4Q9BRT9 223 aa12.29□□□□□ -0.44
C9orf3-217ENST00000479161 MRPL20Q9BYC9 149 aaKnown RBP12.29□□□□□ -0.44
C9orf3-217ENST00000479161 ANAPC10Q9UM13 185 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms