RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 HMGN3Q15651 99 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 SRSF7Q16629 238 aaKnown RBP eCLIP10.25□□□□□ -0.77
VCL-205ENST00000478896 LRRC36Q1X8D7 754 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 TTC23Q5W5X9 447 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 ZNF660Q6AZW8 331 aaPredicted RBP10.25□□□□□ -0.77
VCL-205ENST00000478896 GLDNQ6ZMI3 551 aaPredicted RBP10.25□□□□□ -0.77
VCL-205ENST00000478896 SULT4A1Q9BR01 284 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 TMEM59Q9BXS4 323 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 TOLLIPQ9H0E2 274 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 RNF150Q9ULK6 438 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 FBXO7Q9Y3I1 522 aa10.25□□□□□ -0.77
VCL-205ENST00000478896 EFCAB10A6NFE3 127 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 H7C2Y5 167 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 SOX15O60248 233 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 IGHV3-11P01762 117 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 UBBP0CG47 229 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 CD40LGP29965 261 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 WNT4P56705 351 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 TPPP2P59282 170 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 CX3CL1P78423 397 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 ACTBL2Q562R1 376 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 RPL39P5Q59GN2 51 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 LY6G6FQ5SQ64 297 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 C6orf141Q5SZD1 244 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 PYHIN1Q6K0P9 492 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 UNQ5815/PRO19632Q6UWF5 114 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 C6orf201Q7Z4U5 140 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 ZNF485Q8NCK3 441 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 GGHQ92820 318 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 FLYWCH2Q96CP2 140 aaKnown RBP10.24□□□□□ -0.77
VCL-205ENST00000478896 OR4C12Q96R67 309 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 FAM103A1Q9BTL3 118 aaKnown RBP10.24□□□□□ -0.77
VCL-205ENST00000478896 FAAP24Q9BTP7 215 aa10.24□□□□□ -0.77
VCL-205ENST00000478896 LYL1P12980 280 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 CRIP2P52943 208 aaPredicted RBP10.23□□□□□ -0.77
VCL-205ENST00000478896 RBM48Q5RL73 367 aaKnown RBP10.23□□□□□ -0.77
VCL-205ENST00000478896 GLT8D1Q68CQ7 371 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 OR10K2Q6IF99 312 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 ACSM6Q6P461 480 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 AHSA2Q719I0 299 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 LYPD6Q86Y78 171 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 SVOPQ8N4V2 548 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 MS4A10Q96PG2 267 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 CLCC1Q96S66 551 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 RSRP1Q9BUV0 290 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 SLC23A1Q9UHI7 598 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 WASHC3Q9Y3C0 194 aa10.23□□□□□ -0.77
VCL-205ENST00000478896 TRIM64CA6NLI5 447 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 H0YJW9 148 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 RBBP9O75884 186 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 HSPB1P04792 205 aaKnown RBP10.22□□□□□ -0.77
VCL-205ENST00000478896 CT45A6P0DMU7 189 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 CT45A5P0DMU8 189 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 CT45A7P0DMV0 189 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 MC5RP33032 325 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 C19orf54Q5BKX5 351 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 MOB1BQ7L9L4 216 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 PPP1R27Q86WC6 154 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 DHRSXQ8N5I4 330 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 ABHD14BQ96IU4 210 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 NICN1Q9BSH3 213 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 ELOVL1Q9BW60 279 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 ZNF355PQ9NSJ1 428 aa10.22□□□□□ -0.77
VCL-205ENST00000478896 CNOT2Q9NZN8 540 aaKnown RBP10.22□□□□□ -0.77
VCL-205ENST00000478896 METTL1Q9UBP6 276 aaKnown RBP10.22□□□□□ -0.77
VCL-205ENST00000478896 HSPA12AO43301 675 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 CA2P00918 260 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 CD1AP06126 327 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 CPEP16870 476 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 RPS27AP62979 156 aaKnown RBP10.21□□□□□ -0.77
VCL-205ENST00000478896 INSL4Q14641 139 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 CD200R1LQ6Q8B3 271 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 HAPLN4Q86UW8 402 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 C8orf59Q8N0T1 100 aaPredicted RBP10.21□□□□□ -0.77
VCL-205ENST00000478896 LFNGQ8NES3 379 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 KCNG3Q8TAE7 436 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 EDARADDQ8WWZ3 215 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 KCNK15Q9H427 330 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 SLA2Q9H6Q3 261 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 TPSG1Q9NRR2 321 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 PLEKHJ1Q9NW61 149 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 GAB2Q9UQC2 676 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 NUBP2Q9Y5Y2 271 aa10.21□□□□□ -0.77
VCL-205ENST00000478896 FCN1O00602 326 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 SLC22A1O15245 554 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 TRGV3P03979 118 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 TFAP2AP05549 437 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 HTR2CP28335 458 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 HLA-DRB3P79483 266 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 ACSM3Q53FZ2 586 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 AKIRIN2Q53H80 203 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 ANKRD13BQ86YJ7 626 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 SGPP2Q8IWX5 399 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 BPIFB6Q8NFQ5 453 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 GRPEL2Q8TAA5 225 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 TMED9Q9BVK6 235 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 TM2D1Q9BX74 207 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 PARP12Q9H0J9 701 aaKnown RBP10.2□□□□□ -0.78
VCL-205ENST00000478896 C8orf4Q9NR00 106 aa10.2□□□□□ -0.78
VCL-205ENST00000478896 OR1A1Q9P1Q5 309 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms