RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 FCGR1BQ92637 280 aa18.42■□□□□ 0.54
C9orf3-215ENST00000478473 LINC00527Q9UJ94 153 aa18.42■□□□□ 0.54
C9orf3-215ENST00000478473 CD33P20138 364 aa18.41■□□□□ 0.54
C9orf3-215ENST00000478473 ZBTB25P24278 435 aa18.41■□□□□ 0.54
C9orf3-215ENST00000478473 OR10A3P58181 314 aa18.41■□□□□ 0.54
C9orf3-215ENST00000478473 PLA2G7Q13093 441 aa18.41■□□□□ 0.54
C9orf3-215ENST00000478473 HES5Q5TA89 166 aa18.41■□□□□ 0.54
C9orf3-215ENST00000478473 ETV3LQ6ZN32 361 aa18.41■□□□□ 0.54
C9orf3-215ENST00000478473 NPBQ8NG41 125 aa18.41■□□□□ 0.54
C9orf3-215ENST00000478473 EDARADDQ8WWZ3 215 aa18.41■□□□□ 0.54
C9orf3-215ENST00000478473 CMSS1Q9BQ75 279 aaKnown RBP18.41■□□□□ 0.54
C9orf3-215ENST00000478473 HSPB9Q9BQS6 159 aa18.41■□□□□ 0.54
C9orf3-215ENST00000478473 RAB27BO00194 218 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 ST8SIA5O15466 376 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 NDUFA3O95167 84 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 DUS4LO95620 317 aaKnown RBP18.4■□□□□ 0.54
C9orf3-215ENST00000478473 DIRAS3O95661 229 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 HLA-DRB1P01911 266 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 PF4P02776 101 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 RAB3BP20337 219 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 MYL9P24844 172 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 ACTBP60709 375 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 NR2C2APQ86WQ0 139 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 LINC00482Q8N8I6 264 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 PHF21AQ96BD5 680 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 RCC1LQ96I51 464 aaKnown RBP18.4■□□□□ 0.54
C9orf3-215ENST00000478473 RITA1Q96K30 269 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 PARP12Q9H0J9 701 aaKnown RBP18.4■□□□□ 0.54
C9orf3-215ENST00000478473 NECAP2Q9NVZ3 263 aa18.4■□□□□ 0.54
C9orf3-215ENST00000478473 IGKV1-6A0A0C4DH72 117 aa18.39■□□□□ 0.53
C9orf3-215ENST00000478473 RRP9O43818 475 aaKnown RBP18.39■□□□□ 0.53
C9orf3-215ENST00000478473 IGHG4P01861 327 aa18.39■□□□□ 0.53
C9orf3-215ENST00000478473 ELANEP08246 267 aa18.39■□□□□ 0.53
C9orf3-215ENST00000478473 SCTP09683 121 aa18.39■□□□□ 0.53
C9orf3-215ENST00000478473 THBS3P49746 956 aa18.39■□□□□ 0.53
C9orf3-215ENST00000478473 FOXE3Q13461 319 aa18.39■□□□□ 0.53
C9orf3-215ENST00000478473 MMDQ15546 238 aa18.39■□□□□ 0.53
C9orf3-215ENST00000478473 OR5AN1Q8NGI8 311 aa18.39■□□□□ 0.53
C9orf3-215ENST00000478473 SETD6Q8TBK2 473 aa18.39■□□□□ 0.53
C9orf3-215ENST00000478473 RAB3CQ96E17 227 aa18.39■□□□□ 0.53
C9orf3-215ENST00000478473 RBMXL1Q96E39 390 aaKnown RBP18.39■□□□□ 0.53
C9orf3-215ENST00000478473 C11orf54Q9H0W9 315 aaPredicted RBP18.39■□□□□ 0.53
C9orf3-215ENST00000478473 OR5H14A6NHG9 310 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 TRDCB7Z8K6 153 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 MFNGO00587 321 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 PROP1O75360 226 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 CT45A6P0DMU7 189 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 CT45A5P0DMU8 189 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 CT45A7P0DMV0 189 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 CEACAM6P40199 344 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 MOGAT2Q3SYC2 334 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 KHDC1LQ5JSQ8 128 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 C22orf42Q6IC83 251 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 OR10R2Q8NGX6 335 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 P2RX4Q99571 388 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 OR1A1Q9P1Q5 309 aa18.38■□□□□ 0.53
C9orf3-215ENST00000478473 ZNF107Q9UII5 783 aaPredicted RBP18.38■□□□□ 0.53
C9orf3-215ENST00000478473 NBR2O15453 112 aa18.37■□□□□ 0.53
C9orf3-215ENST00000478473 OR5H8P0DN80 308 aa18.37■□□□□ 0.53
C9orf3-215ENST00000478473 IGLL1P15814 213 aa18.37■□□□□ 0.53
C9orf3-215ENST00000478473 MC5RP33032 325 aa18.37■□□□□ 0.53
C9orf3-215ENST00000478473 MYCNOSP40205 109 aa18.37■□□□□ 0.53
C9orf3-215ENST00000478473 SERPINB10P48595 397 aa18.37■□□□□ 0.53
C9orf3-215ENST00000478473 SRSF7Q16629 238 aaKnown RBP eCLIP18.37■□□□□ 0.532e-7■■■■■ 30.9
C9orf3-215ENST00000478473 C5orf64Q2M2E5 130 aa18.37■□□□□ 0.53
C9orf3-215ENST00000478473 MRPL41Q8IXM3 137 aaKnown RBP18.37■□□□□ 0.53
C9orf3-215ENST00000478473 OR4A4PQ8NGN8 299 aa18.37■□□□□ 0.53
C9orf3-215ENST00000478473 RNF5Q99942 180 aa18.37■□□□□ 0.53
C9orf3-215ENST00000478473 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.37■□□□□ 0.53
C9orf3-215ENST00000478473 TXNL4BQ9NX01 149 aaKnown RBP18.37■□□□□ 0.53
C9orf3-215ENST00000478473 DNAH3Q8TD57 4116 aa18.37■□□□□ 0.53
C9orf3-215ENST00000478473 PPIFP30405 207 aaKnown RBP18.36■□□□□ 0.53
C9orf3-215ENST00000478473 CDX1P47902 265 aaPredicted RBP18.36■□□□□ 0.53
C9orf3-215ENST00000478473 RPL39P5Q59GN2 51 aa18.36■□□□□ 0.53
C9orf3-215ENST00000478473 FOXB2Q5VYV0 432 aa18.36■□□□□ 0.53
C9orf3-215ENST00000478473 ZNF773Q6PK81 442 aa18.36■□□□□ 0.53
C9orf3-215ENST00000478473 Q6ZS49 121 aa18.36■□□□□ 0.53
C9orf3-215ENST00000478473 TPRA1Q86W33 373 aa18.36■□□□□ 0.53
C9orf3-215ENST00000478473 ZNF695Q8IW36 515 aa18.36■□□□□ 0.53
C9orf3-215ENST00000478473 MYOZ3Q8TDC0 251 aa18.36■□□□□ 0.53
C9orf3-215ENST00000478473 ABHD14BQ96IU4 210 aa18.36■□□□□ 0.53
C9orf3-215ENST00000478473 CABLES2Q9BTV7 478 aa18.36■□□□□ 0.53
C9orf3-215ENST00000478473 STUB1Q9UNE7 303 aa18.36■□□□□ 0.53
C9orf3-215ENST00000478473 GAB2Q9UQC2 676 aa18.36■□□□□ 0.53
C9orf3-215ENST00000478473 H0YJW9 148 aa18.35■□□□□ 0.53
C9orf3-215ENST00000478473 RBBP9O75884 186 aa18.35■□□□□ 0.53
C9orf3-215ENST00000478473 HIST1H1DP16402 221 aaKnown RBP18.35■□□□□ 0.53
C9orf3-215ENST00000478473 GADD45AP24522 165 aa18.35■□□□□ 0.53
C9orf3-215ENST00000478473 CNTFRP26992 372 aa18.35■□□□□ 0.53
C9orf3-215ENST00000478473 PSMB8P28062 276 aa18.35■□□□□ 0.53
C9orf3-215ENST00000478473 C18orf65Q6ZTR6 163 aa18.35■□□□□ 0.53
C9orf3-215ENST00000478473 IGHV7-81A0A0B4J1V7 117 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 METTL21EPA6NDL7 271 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 NOTOA8MTQ0 251 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 HSPA12AO43301 675 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 FCGR3AP08637 254 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 CD3GP09693 182 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 VDAC1P21796 283 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 PSMB9P28065 219 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 CRIP2P52943 208 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms