RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 MLLT11Q13015 90 aaPredicted RBP1.21□□□□□ -2.22
VPS50-213ENST00000477572 SRSF6Q13247 344 aaKnown RBP1.21□□□□□ -2.22
VPS50-213ENST00000477572 DHRS2Q13268 280 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 SKP2Q13309 424 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 KRR1Q13601 381 aaKnown RBP1.21□□□□□ -2.22
VPS50-213ENST00000477572 RAB31Q13636 194 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 OR4D1Q15615 310 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 ZNF404Q494X3 552 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 ATP6AP1LQ52LC2 224 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 ACSM3Q53FZ2 586 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 PCOTHQ58A44 107 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 SYT6Q5T7P8 510 aaPredicted RBP1.21□□□□□ -2.22
VPS50-213ENST00000477572 FAM45BPQ6NSW5 357 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 DNM1P34Q6PK57 102 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 PHF13Q86YI8 300 aaPredicted RBP1.21□□□□□ -2.22
VPS50-213ENST00000477572 TRAPPC5Q8IUR0 188 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 LRRC18Q8N456 261 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 ATPAF2Q8N5M1 289 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 TMEM251Q8N6I4 163 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 ZNF738Q8NE65 137 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 BPIFB6Q8NFQ5 453 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 OR2Y1Q8NGV0 311 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 OR6K3Q8NGY3 331 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 OR6N2Q8NGY6 317 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 OR2AE1Q8NHA4 323 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 OR5P2Q8WZ92 322 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 APOBEC3DQ96AK3 386 aaPredicted RBP1.21□□□□□ -2.22
VPS50-213ENST00000477572 UBE2WQ96B02 151 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 TCEAL4Q96EI5 215 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 RILPQ96NA2 401 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 C20orf166-AS1Q96NR2 134 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 YPEL4Q96NS1 127 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 PPP1R2P1Q96PQ5 205 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 TSC22D3Q99576 134 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 C12orf57Q99622 126 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 YIPF3Q9GZM5 350 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 SYT4Q9H2B2 425 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 C11orf49Q9H6J7 331 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 ANXA10Q9UJ72 324 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 USH1CQ9Y6N9 552 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 U3KQK5 164 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 WNK3Q9BYP7 1800 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 CCDC180Q9P1Z9 1646 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 BICRAQ9NZM4 1560 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 FLT4P35916 1363 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 MYH2Q9UKX2 1941 aa1.21□□□□□ -2.22
VPS50-213ENST00000477572 ABCB11O95342 1321 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 ERCC6Q03468 1493 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 WDR7Q9Y4E6 1490 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 TGIF2-C20orf24A0A0A6YYL0 155 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 IGHV3-43A0A0B4J1X8 118 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 C21orf140B9A014 251 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 M0QZK8 103 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 KCNK1O00180 336 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 PRMT5O14744 637 aaPredicted RBP1.2□□□□□ -2.22
VPS50-213ENST00000477572 UBDO15205 165 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 SLC16A4O15374 487 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 FGF16O43320 207 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 ENSAO43768 121 aaKnown RBP1.2□□□□□ -2.22
VPS50-213ENST00000477572 KLRC4O43908 158 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 FADS1O60427 444 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 MPZL2O60487 215 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 IFNA21P01568 189 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 ORM1P02763 201 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 PPBPP02775 128 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 SOD3P08294 240 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 CGB3P0DN86 165 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 CGB7P0DN87 165 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 GTF2F2P13984 249 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 UCHL3P15374 230 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 CD36P16671 472 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 GZMHP20718 246 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 CSRP1P21291 193 aaKnown RBP1.2□□□□□ -2.22
VPS50-213ENST00000477572 RPS12P25398 132 aaKnown RBP1.2□□□□□ -2.22
VPS50-213ENST00000477572 S100A7P31151 101 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 RPL5P46777 297 aaKnown RBP1.2□□□□□ -2.22
VPS50-213ENST00000477572 CCL23P55773 120 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 OR4D2P58180 307 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 OR10A3P58181 314 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 RHOAP61586 193 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 DEFB103AP81534 67 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 RPL19P84098 196 aaKnown RBP1.2□□□□□ -2.22
VPS50-213ENST00000477572 APOFQ13790 326 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 TAL2Q16559 108 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 WHAMMP3Q1A5X7 153 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 AKIRIN2Q53H80 203 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 ACTL10Q5JWF8 245 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 SDHAF4Q5VUM1 108 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 TRIQKQ629K1 86 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 FAHD1Q6P587 224 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 DHRS4L2Q6PKH6 230 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 UGT2A3Q6UWM9 527 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 DRAM2Q6UX65 266 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 OR6V1Q8N148 313 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 RPRMLQ8N4K4 120 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 C3orf22Q8N5N4 141 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 UBL4BQ8N7F7 174 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 LFNGQ8NES3 379 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 OR51D1Q8NGF3 324 aa1.2□□□□□ -2.22
VPS50-213ENST00000477572 OR10K1Q8NGX5 313 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms