RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 LYG1Q8N1E2 194 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 OR51S1Q8NGJ8 323 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 OR8U1Q8NH10 309 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 FAM216AQ8WUB2 273 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 MOB3AQ96BX8 217 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 PRRT1Q99946 306 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 C7orf50Q9BRJ6 194 aaKnown RBP13.15□□□□□ -0.3
VHL-203ENST00000477538 AGMATQ9BSE5 352 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 IFI27L2Q9H2X8 130 aa13.15□□□□□ -0.3
VHL-203ENST00000477538 TBL2Q9Y4P3 447 aaKnown RBP13.15□□□□□ -0.3
VHL-203ENST00000477538 NAP1L6A6NFF2 107 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 BUB1B-PAK6H3BSN5 160 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 PLA2G10O15496 165 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 IL3RAP26951 378 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 HTR1DP28221 377 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 SAA4P35542 130 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 Q71RC1 249 aaPredicted RBP13.14□□□□□ -0.31
VHL-203ENST00000477538 LHFPL1Q86WI0 220 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 LDLRAD3Q86YD5 345 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 SECTM1Q8WVN6 248 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 TOMM40LQ969M1 308 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 ABHD14BQ96IU4 210 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 FXYD6Q9H0Q3 95 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 OR2D2Q9H210 308 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 SLC2A8Q9NY64 477 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 SCP2D1Q9UJQ7 156 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 ZNF221Q9UK13 617 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 NUP50Q9UKX7 468 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 RNF150Q9ULK6 438 aa13.14□□□□□ -0.31
VHL-203ENST00000477538 SAA2-SAA4A0A096LPE2 208 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 OR5H14A6NHG9 310 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 LYRM1O43325 122 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 SAA2P0DJI9 122 aaPredicted RBP13.13□□□□□ -0.31
VHL-203ENST00000477538 EPHA1P21709 976 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 GPR12P47775 334 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 BPIFB3P59826 476 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 MINOS1Q5TGZ0 78 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 AADACL3Q5VUY0 350 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 LHFPL4Q7Z7J7 247 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 ODF3L1Q8IXM7 274 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 TERB2Q8NHR7 220 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 CREB3L1Q96BA8 519 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 SLC5A7Q9GZV3 580 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 GHITMQ9H3K2 345 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 PIPOXQ9P0Z9 390 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 TBC1D24Q9ULP9 559 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 MINOS1-NBL1R4GNA1 71 aa13.13□□□□□ -0.31
VHL-203ENST00000477538 LEUTXA8MZ59 168 aa13.12□□□□□ -0.31
VHL-203ENST00000477538 RAB29O14966 203 aa13.12□□□□□ -0.31
VHL-203ENST00000477538 SRP14P37108 136 aaKnown RBP13.12□□□□□ -0.31
VHL-203ENST00000477538 CEACAM3P40198 252 aa13.12□□□□□ -0.31
VHL-203ENST00000477538 ZNF137PP52743 207 aa13.12□□□□□ -0.31
VHL-203ENST00000477538 ASAH1Q13510 395 aa13.12□□□□□ -0.31
VHL-203ENST00000477538 LDLRAD2Q5SZI1 272 aa13.12□□□□□ -0.31
VHL-203ENST00000477538 IDO2Q6ZQW0 420 aa13.12□□□□□ -0.31
VHL-203ENST00000477538 ZNF645Q8N7E2 425 aa13.12□□□□□ -0.31
VHL-203ENST00000477538 MS4A7Q9GZW8 240 aaPredicted RBP13.12□□□□□ -0.31
VHL-203ENST00000477538 DPM3Q9P2X0 92 aa13.12□□□□□ -0.31
VHL-203ENST00000477538 MTORP42345 2549 aa13.12□□□□□ -0.31
VHL-203ENST00000477538 NSD1Q96L73 2696 aaPredicted RBP13.11□□□□□ -0.31
VHL-203ENST00000477538 LY6LH3BQJ8 138 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 HSD17B6O14756 317 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 SLC22A5O76082 557 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 BTCP35070 178 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 UCP3P55916 312 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 DEFA1P59665 94 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 DEFA3P59666 94 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 TPTE2P1Q5T6R2 138 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 MZT2BQ6NZ67 158 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.11□□□□□ -0.31
VHL-203ENST00000477538 OR13C8Q8NGS7 320 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 C17orf50Q8WW18 174 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 ST6GALNAC6Q969X2 333 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 MRGPRFQ96AM1 343 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 RPEQ96AT9 228 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 S1PR3Q99500 378 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 PALMDQ9NP74 551 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 CCL28Q9NRJ3 127 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 HILPDAQ9Y5L2 63 aa13.11□□□□□ -0.31
VHL-203ENST00000477538 A0A0U1RQK1 487 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 PGAM2P15259 253 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 ECI1P42126 302 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 CCR6P51684 374 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 DCTN2Q13561 401 aaKnown RBP13.1□□□□□ -0.31
VHL-203ENST00000477538 DIAPH2-AS1Q14236 149 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 RPL39P5Q59GN2 51 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 FAM71F2Q6NXP2 309 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 LPCAT3Q6P1A2 487 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 ZNF833PQ6ZTB9 187 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 DRAM1Q8N682 238 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 MARCH1Q8TCQ1 289 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 MALSU1Q96EH3 234 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 C5orf30Q96GV9 206 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 AJUBAQ96IF1 538 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 ZNF251Q9BRH9 671 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 BEX2Q9BXY8 128 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 SDHAF2Q9NX18 166 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 CDC42EP3Q9UKI2 254 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms