RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	SCGB1D2	O95969	90 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	TNF	P01375	233 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	GYPA	P02724	150 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	LINC00869	P0C866	280 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	IGLC1	P0CG04	106 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	GZMH	P20718	246 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	PTN	P21246	168 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	HNRNPA2B1	P22626	353 aa	Known RBP	4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	NPY1R	P25929	384 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	IL3RA	P26951	378 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	GCH1	P30793	250 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	PTGER4	P35408	488 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	CXCL12	P48061	93 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	GNB2	P62879	340 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	HBG1	P69891	147 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	HBG2	P69892	147 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	ARG2	P78540	354 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	CCL7	P80098	99 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	FOXI1	Q12951	378 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZNF141	Q15928	474 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	TMEM215	Q68D42	235 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	LCN10	Q6JVE6	187 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	FA2H	Q7L5A8	372 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	SYT13	Q7L8C5	426 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	NEGR1	Q7Z3B1	354 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	WDR5B	Q86VZ2	330 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	LRP11	Q86VZ4	500 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	BAGE3	Q86Y29	109 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	BAGE2	Q86Y30	109 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	CALHM1	Q8IU99	346 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	SPEM1	Q8N4L4	309 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	GVQW1	Q8N7I0	195 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	LRRC75A	Q8NAA5	344 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	OR10G3	Q8NGC4	313 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	OR10G8	Q8NGN5	311 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	CLDN23	Q96B33	292 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	C10orf35	Q96D05	121 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	CNRIP1	Q96F85	164 aa	Predicted RBP	4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	MRAP2	Q96G30	205 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZNF479	Q96JC4	524 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	FER1L6-AS2	Q96M78	137 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	CLUHP3	Q96NS8	147 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	FOXB1	Q99853	325 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	NICN1	Q9BSH3	213 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	SPX	Q9BT56	116 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	TM2D1	Q9BX74	207 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	TMEM59	Q9BXS4	323 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	SH3BGRL3	Q9H299	93 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	VCX2	Q9H322	139 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	FGF21	Q9NSA1	209 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	SLC39A9	Q9NUM3	307 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	NECAP2	Q9NVZ3	263 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	CLEC5A	Q9NY25	188 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	TAS2R4	Q9NYW5	299 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	LRIT1	Q9P2V4	623 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	VDAC3	Q9Y277	283 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	RCL1	Q9Y2P8	373 aa	Known RBP	4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	KCNE3	Q9Y6H6	103 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	SPACA6	W5XKT8	324 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	NUMA1	Q14980	2115 aa		4.01	□□□□□ -1.77
PTCD3-212	ENST00000477520	UNC80	Q8N2C7	3258 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	XIRP2	A4UGR9	3374 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520		A0A1B0GVT2	93 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	SHISA7	A6NL88	538 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZFP92	A6NM28	416 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	VSTM5	A8MXK1	200 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	C17orf105	B2RV13	164 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520		H3BMH7	237 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520		M0QZ24	198 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	SLC25A17	O43808	307 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	NKX2-2	O95096	273 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	MT-ATP6	P00846	226 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	WNT2	P09544	360 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZNF728	P0DKX0	622 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	PSG1	P11464	419 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	KITLG	P21583	273 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	VDAC1	P21796	283 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	ZNF93	P35789	620 aa	Predicted RBP	4	□□□□□ -1.77
PTCD3-212	ENST00000477520	PLA2G5	P39877	138 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	GPR6	P46095	362 aa	Predicted RBP	4	□□□□□ -1.77
PTCD3-212	ENST00000477520	CTXN1	P60606	82 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	SSBP2	P81877	361 aa	Predicted RBP	4	□□□□□ -1.77
PTCD3-212	ENST00000477520	PRDX1	Q06830	199 aa	Known RBP	4	□□□□□ -1.77
PTCD3-212	ENST00000477520	TMEM267	Q0VDI3	215 aa	Predicted RBP	4	□□□□□ -1.77
PTCD3-212	ENST00000477520	UNC119	Q13432	240 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	RAB31	Q13636	194 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	OR8B8	Q15620	311 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	CST6	Q15828	149 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	SRSF7	Q16629	238 aa	Known RBP eCLIP	4	□□□□□ -1.77
PTCD3-212	ENST00000477520	MEP1B	Q16820	701 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	HLA-DRB5	Q30154	266 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	CD300E	Q496F6	205 aa	Predicted RBP	4	□□□□□ -1.77
PTCD3-212	ENST00000477520	ABHD17C	Q6PCB6	329 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	UNQ5815/PRO19632	Q6UWF5	114 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	MOB1B	Q7L9L4	216 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	SFTPA1	Q8IWL2	248 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	OR4N5	Q8IXE1	308 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	FAM58A	Q8N1B3	248 aa		4	□□□□□ -1.77
PTCD3-212	ENST00000477520	TMEM256	Q8N2U0	113 aa		4	□□□□□ -1.77

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