RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 SNRPBP14678 240 aaKnown RBP11.03□□□□□ -0.64
UPF3A-204ENST00000475218 ACTBP60709 375 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 SLC35B1P78383 322 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 KIAA0141Q14154 515 aaPredicted RBP11.03□□□□□ -0.64
UPF3A-204ENST00000475218 PNLIPRP3Q17RR3 467 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 TEX38Q6PEX7 206 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 ZNF695Q8IW36 515 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 OR51D1Q8NGF3 324 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 RASL11BQ9BPW5 248 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 AGMATQ9BSE5 352 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 YTHDF1Q9BYJ9 559 aaKnown RBP11.03□□□□□ -0.64
UPF3A-204ENST00000475218 CEPT1Q9Y6K0 416 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 A0A087WXM4 84 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 PROP1O75360 226 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 IGHG4P01861 327 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 SOX6P35712 828 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 MYCNOSP40205 109 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 FOXE3Q13461 319 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 DEFB136Q30KP8 78 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 PLAC9Q5JTB6 97 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 MYOZ3Q8TDC0 251 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 IL1F10Q8WWZ1 152 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 CCDC90BQ9GZT6 254 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 OR1A1Q9P1Q5 309 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 ZNF580Q9UK33 172 aa11.03□□□□□ -0.64
UPF3A-204ENST00000475218 IGKV1-6A0A0C4DH72 117 aa11.02□□□□□ -0.65
UPF3A-204ENST00000475218 DUS4LO95620 317 aaKnown RBP11.02□□□□□ -0.65
UPF3A-204ENST00000475218 ARSBP15848 533 aa11.02□□□□□ -0.65
UPF3A-204ENST00000475218 PSMB8P28062 276 aa11.02□□□□□ -0.65
UPF3A-204ENST00000475218 PPIFP30405 207 aaKnown RBP11.02□□□□□ -0.65
UPF3A-204ENST00000475218 MMDQ15546 238 aa11.02□□□□□ -0.65
UPF3A-204ENST00000475218 RPL39P5Q59GN2 51 aa11.02□□□□□ -0.65
UPF3A-204ENST00000475218 OR2AK2Q8NG84 335 aa11.02□□□□□ -0.65
UPF3A-204ENST00000475218 KCTD7Q96MP8 289 aa11.02□□□□□ -0.65
UPF3A-204ENST00000475218 PLEKHJ1Q9NW61 149 aa11.02□□□□□ -0.65
UPF3A-204ENST00000475218 KCNK7Q9Y2U2 307 aa11.02□□□□□ -0.65
UPF3A-204ENST00000475218 IGHV7-81A0A0B4J1V7 117 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 A0A1B0GVG6 124 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 NUDT19A8MXV4 375 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 G3V318 75 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 NDUFA3O95167 84 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 CT45A6P0DMU7 189 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 CT45A5P0DMU8 189 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 CT45A7P0DMV0 189 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 SLC6A1P30531 599 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 CDX1P47902 265 aaPredicted RBP11.01□□□□□ -0.65
UPF3A-204ENST00000475218 NDPQ00604 133 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 TRAM1Q15629 374 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 TBCEQ15813 527 aaPredicted RBP11.01□□□□□ -0.65
UPF3A-204ENST00000475218 RAB11BQ15907 218 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 NPBQ8NG41 125 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 ARHGAP5-AS1Q96IT6 56 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 PECRQ9BY49 303 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 KLK15Q9H2R5 256 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 PLGRKTQ9HBL7 147 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 Q9N2K0 584 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 SLC23A1Q9UHI7 598 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 HSF4Q9ULV5 492 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 FBXO7Q9Y3I1 522 aa11.01□□□□□ -0.65
UPF3A-204ENST00000475218 CCL24O00175 119 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 ARL6IP5O75915 188 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 RGS11O94810 467 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 HLA-DRB1P01911 266 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 ELANEP08246 267 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 SCTP09683 121 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 PSMA1P25786 263 aaKnown RBP11□□□□□ -0.65
UPF3A-204ENST00000475218 RANBP1P43487 201 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 VEGFCP49767 419 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 OR10A3P58181 314 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 LINC00205P59089 165 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 HLA-DRB3P79483 266 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 C5orf64Q2M2E5 130 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 C2orf76Q3KRA6 126 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 C19orf54Q5BKX5 351 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 CD200R1LQ6Q8B3 271 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 FAM131AQ6UXB0 335 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 NR2C2APQ86WQ0 139 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 SETD6Q8TBK2 473 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 FAM3DQ96BQ1 224 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 ABHD14BQ96IU4 210 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 CHMP1AQ9HD42 196 aaPredicted RBP11□□□□□ -0.65
UPF3A-204ENST00000475218 ACOT13Q9NPJ3 140 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 ABRACLQ9P1F3 81 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 TMEM272A0A1B0GTI8 110 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 ATP6V0E1O15342 81 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 PFDN1O60925 122 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 KIR2DS1Q14954 304 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 MOGAT2Q3SYC2 334 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 CXorf66Q5JRM2 361 aaPredicted RBP11□□□□□ -0.65
UPF3A-204ENST00000475218 HES5Q5TA89 166 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 FAM71F2Q6NXP2 309 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 GLDNQ6ZMI3 551 aaPredicted RBP11□□□□□ -0.65
UPF3A-204ENST00000475218 MOB1BQ7L9L4 216 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 URM1Q9BTM9 101 aaKnown RBP11□□□□□ -0.65
UPF3A-204ENST00000475218 C11orf54Q9H0W9 315 aaPredicted RBP11□□□□□ -0.65
UPF3A-204ENST00000475218 WSB1Q9Y6I7 421 aa11□□□□□ -0.65
UPF3A-204ENST00000475218 H0YJW9 148 aa10.99□□□□□ -0.65
UPF3A-204ENST00000475218 ITGB1BP1O14713 200 aa10.99□□□□□ -0.65
UPF3A-204ENST00000475218 NBR2O15453 112 aa10.99□□□□□ -0.65
UPF3A-204ENST00000475218 IGLV1-40P01703 118 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms