RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SSX1Q16384 188 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 TMEM30BQ3MIR4 351 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 YIF1BQ5BJH7 314 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 RAB12Q6IQ22 244 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 ADAMTSL5Q6ZMM2 481 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 HAPLN4Q86UW8 402 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 ABHD5Q8WTS1 349 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 ISOC1Q96CN7 298 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 RITA1Q96K30 269 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 ABHD14AQ9BUJ0 271 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 SPACA1Q9HBV2 294 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 NDUFB11Q9NX14 153 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 KIAA1456Q9P272 454 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 A3GALT2U3KPV4 340 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 HYDINQ4G0P3 5121 aa10.82□□□□□ -0.68
CCDC78-209ENST00000474647 TRBV5-5A0A0J9YX44 114 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 TFAP2AP05549 437 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 LGALS1P09382 135 aaKnown RBP10.81□□□□□ -0.68
CCDC78-209ENST00000474647 OR8U9P0C7N5 309 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 PSMA1P25786 263 aaKnown RBP10.81□□□□□ -0.68
CCDC78-209ENST00000474647 RPS11P62280 158 aaKnown RBP eCLIP10.81□□□□□ -0.68
CCDC78-209ENST00000474647 TRAM1Q15629 374 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 MORN2Q502X0 79 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 LIN54Q6MZP7 749 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 ACSM6Q6P461 480 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 TRAT1Q6PIZ9 186 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 MS4A15Q8N5U1 240 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 OR13C5Q8NGS8 318 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 OR4C12Q96R67 309 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 TOLLIPQ9H0E2 274 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 CST11Q9H112 138 aa10.81□□□□□ -0.68
CCDC78-209ENST00000474647 RCC2Q9P258 522 aaKnown RBP10.81□□□□□ -0.68
CCDC78-209ENST00000474647 MRPS28Q9Y2Q9 187 aaKnown RBP10.81□□□□□ -0.68
CCDC78-209ENST00000474647 FAM90A10PA6NDY2 464 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 SC5DO75845 299 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 IGHV3-11P01762 117 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 PPP1CCP36873 323 aaKnown RBP10.8□□□□□ -0.68
CCDC78-209ENST00000474647 ALDH3B2P48448 385 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 RPS25P62851 125 aaKnown RBP10.8□□□□□ -0.68
CCDC78-209ENST00000474647 NDPQ00604 133 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 GPR176Q14439 515 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 PLGLAQ15195 96 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 C5orf64Q2M2E5 130 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 JAGN1Q8N5M9 183 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 OR52L2PQ8NGH6 319 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 THRSPQ92748 146 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 NABP2Q9BQ15 211 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 TM2D3Q9BRN9 247 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 RSRP1Q9BUV0 290 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 TMED9Q9BVK6 235 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 TAF9BQ9HBM6 251 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 BATF3Q9NR55 127 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 FOXA2Q9Y261 457 aaPredicted RBP10.8□□□□□ -0.68
CCDC78-209ENST00000474647 FBXO7Q9Y3I1 522 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 PEX16Q9Y5Y5 336 aa10.8□□□□□ -0.68
CCDC78-209ENST00000474647 UBE2QL1A1L167 161 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 LDLRAD4O15165 306 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 SOX15O60248 233 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 IGHV4-30-4P0DP06 118 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 OR3A3P47888 321 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 Q499Y3 187 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 AWAT2Q6E213 333 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 GLIPR1L1Q6UWM5 242 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 C5orf24Q7Z6I8 188 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 ODF3L1Q8IXM7 274 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 MINDY2Q8NBR6 621 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 OR13F1Q8NGS4 319 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 MRPS24Q96EL2 167 aaKnown RBP10.79□□□□□ -0.68
CCDC78-209ENST00000474647 CYYR1Q96J86 154 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 BANF2Q9H503 90 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 KCNIP1Q9NZI2 227 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 CKLFQ9UBR5 152 aa10.79□□□□□ -0.68
CCDC78-209ENST00000474647 SAA2-SAA4A0A096LPE2 208 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 MAS1P04201 325 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 SAA2P0DJI9 122 aaPredicted RBP10.78□□□□□ -0.68
CCDC78-209ENST00000474647 GALP22466 123 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 MAPK3P27361 379 aaPredicted RBP10.78□□□□□ -0.68
CCDC78-209ENST00000474647 STEAP3Q658P3 488 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 CD200R1LQ6Q8B3 271 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 FAM131AQ6UXB0 335 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 SGPP2Q8IWX5 399 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 YIPF6Q96EC8 236 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 MS4A10Q96PG2 267 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 OR14A2Q96R54 314 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 SELENOIQ9C0D9 397 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 FBXL15Q9H469 300 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 JPT1Q9UK76 154 aa10.78□□□□□ -0.68
CCDC78-209ENST00000474647 TRAV8-7A0A075B6U6 113 aa10.77□□□□□ -0.69
CCDC78-209ENST00000474647 TRBV5-7A0A0A0MS05 114 aa10.77□□□□□ -0.69
CCDC78-209ENST00000474647 A6NHS1 94 aa10.77□□□□□ -0.69
CCDC78-209ENST00000474647 CRTAPO75718 401 aaPredicted RBP10.77□□□□□ -0.69
CCDC78-209ENST00000474647 NDUFA3O95167 84 aa10.77□□□□□ -0.69
CCDC78-209ENST00000474647 MGMTP16455 207 aa10.77□□□□□ -0.69
CCDC78-209ENST00000474647 CD36P16671 472 aa10.77□□□□□ -0.69
CCDC78-209ENST00000474647 IGFBP3P17936 291 aaPredicted RBP10.77□□□□□ -0.69
CCDC78-209ENST00000474647 FSTP19883 344 aa10.77□□□□□ -0.69
CCDC78-209ENST00000474647 RPL5P46777 297 aaKnown RBP10.77□□□□□ -0.69
CCDC78-209ENST00000474647 TPPP2P59282 170 aa10.77□□□□□ -0.69
CCDC78-209ENST00000474647 FABP5Q01469 135 aa10.77□□□□□ -0.69
CCDC78-209ENST00000474647 INSL4Q14641 139 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms