RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 KLF9Q13886 244 aaPredicted RBP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SMN1Q16637 294 aaKnown RBP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SPSB3Q6PJ21 355 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SPAG17Q6Q759 2223 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 UQCC3Q6UW78 93 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 PQLC2Q6ZP29 291 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 PNKDQ8N490 385 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 RFESDQ8TAC1 157 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SFT2D1Q8WV19 159 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 ALX4Q9H161 411 aaPredicted RBP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 PARD6AQ9NPB6 346 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 CLCF1Q9UBD9 225 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 CACNG5Q9UF02 275 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 CSAG2Q9Y5P2 127 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 V9GYS6 101 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 ZSWIM8A7E2V4 1837 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 TRBV5-5A0A0J9YX44 114 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 KBTBD11-OT1A0A1B0GTJ5 212 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 MFSD2BA6NFX1 497 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 FAM157AC9JC47 383 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 UBE2L6O14933 153 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 KBTBD11O94819 623 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 TIAF1O95411 115 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 TTRP02766 147 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 TRGC1P0CF51 173 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SULT1A1P50225 295 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 TPPP2P59282 170 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 ARF6P62330 175 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 UBE2L3P68036 154 aaKnown RBP3.95□□□□□ -1.78
CCNL1-215ENST00000474539 OR2B11Q5JQS5 317 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SAPCD1Q5SSQ6 148 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 PPP1R27Q86WC6 154 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 OR2C3Q8N628 320 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 BVESQ8NE79 360 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 OR5T1Q8NG75 326 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 CACNG8Q8WXS5 425 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 SLC50A1Q9BRV3 221 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 MAGT1Q9H0U3 335 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 VSIG4Q9Y279 399 aa3.95□□□□□ -1.78
CCNL1-215ENST00000474539 F5P12259 2224 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 SEC14L6B5MCN3 397 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 PPP5D1E7EU14 171 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 GATCO43716 136 aaKnown RBP3.94□□□□□ -1.78
CCNL1-215ENST00000474539 TRGV3P03979 118 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 CELA2AP08217 269 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 LINC00271P0C7V0 271 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 RPS19P39019 145 aaKnown RBP3.94□□□□□ -1.78
CCNL1-215ENST00000474539 TCF15Q12870 199 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 FFAR4Q5NUL3 377 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 ATP1A1-AS1Q5TC04 95 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 VWA1Q6PCB0 445 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 PET117Q6UWS5 81 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 LAX1Q8IWV1 398 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 BAP18Q8IXM2 172 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 HSD17B11Q8NBQ5 300 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 OR1B1Q8NGR6 318 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 MYO18AQ92614 2054 aaKnown RBP3.94□□□□□ -1.78
CCNL1-215ENST00000474539 F5H697 171 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 BCL2L11O43521 198 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 YPEL1O60688 119 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 ZG16O60844 167 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 CD3DP04234 171 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 IAPPP10997 89 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 SLC6A1P30531 599 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 CEACAM8P31997 349 aaPredicted RBP3.94□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF90Q03938 601 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 FOXL1Q12952 345 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 FXYD3Q14802 87 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 TEX38Q6PEX7 206 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 THSD4Q6ZMP0 1018 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 FA2HQ7L5A8 372 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 TBC1D26Q86UD7 250 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 TMEM158Q8WZ71 300 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 YPEL2Q96QA6 119 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 SRRQ9GZT4 340 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 GNG13Q9P2W3 67 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF257Q9Y2Q1 563 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 HKR1P10072 659 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 CRYBB2P43320 205 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 ELLP55199 621 aaPredicted RBP3.94□□□□□ -1.78
CCNL1-215ENST00000474539 DLK1P80370 383 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 H3F3AP84243 136 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 DAZAP2Q15038 168 aaPredicted RBP3.94□□□□□ -1.78
CCNL1-215ENST00000474539 USF2Q15853 346 aaPredicted RBP3.94□□□□□ -1.78
CCNL1-215ENST00000474539 PVRIGQ6DKI7 326 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 OR4C16Q8NGL9 310 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 AQP3Q92482 292 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 ARPC1AQ92747 370 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 KCNS1Q96KK3 526 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 PRSS27Q9BQR3 290 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 SLC25A33Q9BSK2 321 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 REPIN1Q9BWE0 567 aaKnown RBP3.94□□□□□ -1.78
CCNL1-215ENST00000474539 NXF2Q9GZY0 626 aaKnown RBP3.94□□□□□ -1.78
CCNL1-215ENST00000474539 TMEM133Q9H2Q1 129 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 RPS10P5Q9NQ39 176 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF727A8MUV8 499 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 HRKO00198 91 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 UPK2O00526 184 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 CTDSP2O14595 271 aa3.94□□□□□ -1.78
CCNL1-215ENST00000474539 SIGLEC5O15389 551 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms