RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 CLDN12P56749 244 aa12.22□□□□□ -0.45
CLIC3-201ENST00000473911 FAM71F2Q6NXP2 309 aa12.22□□□□□ -0.45
CLIC3-201ENST00000473911 ZNF367Q7RTV3 350 aa12.22□□□□□ -0.45
CLIC3-201ENST00000473911 FAM3DQ96BQ1 224 aa12.22□□□□□ -0.45
CLIC3-201ENST00000473911 C12orf4Q9NQ89 552 aa12.22□□□□□ -0.45
CLIC3-201ENST00000473911 KIAA1456Q9P272 454 aa12.22□□□□□ -0.45
CLIC3-201ENST00000473911 SLC23A1Q9UHI7 598 aa12.22□□□□□ -0.45
CLIC3-201ENST00000473911 HSF4Q9ULV5 492 aa12.22□□□□□ -0.45
CLIC3-201ENST00000473911 MGAT4AQ9UM21 535 aa12.22□□□□□ -0.45
CLIC3-201ENST00000473911 V9GY05 133 aa12.22□□□□□ -0.45
CLIC3-201ENST00000473911 TRBV6-6A0A0A6YYG2 114 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 CCL24O00175 119 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 NBR2O15453 112 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 IGHG4P01861 327 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 IGF1P05019 195 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 CNTFRP26992 372 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 HLA-DRB3P79483 266 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 TBCEQ15813 527 aaPredicted RBP12.21□□□□□ -0.45
CLIC3-201ENST00000473911 C2orf76Q3KRA6 126 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 RPL39P5Q59GN2 51 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 HES5Q5TA89 166 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 FAM131AQ6UXB0 335 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 FAM89BQ8N5H3 189 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 OR56B1Q8NGI3 324 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 OR8U1Q8NH10 309 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 RAX2Q96IS3 184 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 ARHGAP5-AS1Q96IT6 56 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 RITA1Q96K30 269 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 KCTD7Q96MP8 289 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 P2RX4Q99571 388 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 CMSS1Q9BQ75 279 aaKnown RBP12.21□□□□□ -0.45
CLIC3-201ENST00000473911 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.21□□□□□ -0.45
CLIC3-201ENST00000473911 PARP11Q9NR21 331 aa12.21□□□□□ -0.45
CLIC3-201ENST00000473911 PDCD5O14737 125 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 DENRO43583 198 aaKnown RBP12.2□□□□□ -0.46
CLIC3-201ENST00000473911 ZBTB25P24278 435 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 CEACAM6P40199 344 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 CDX1P47902 265 aaPredicted RBP12.2□□□□□ -0.46
CLIC3-201ENST00000473911 KRTAP10-11P60412 298 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 MRPS15P82914 257 aaKnown RBP12.2□□□□□ -0.46
CLIC3-201ENST00000473911 CFHR3Q02985 330 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 C5orf64Q2M2E5 130 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 DEFB136Q30KP8 78 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 DEFB121Q5J5C9 76 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 LIN54Q6MZP7 749 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 TMEM65Q6PI78 240 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 RNF152Q8N8N0 203 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 EDARADDQ8WWZ3 215 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 ABHD14BQ96IU4 210 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 PECRQ9BY49 303 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 PARP12Q9H0J9 701 aaKnown RBP12.2□□□□□ -0.46
CLIC3-201ENST00000473911 OR51J1Q9H342 316 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 Q9N2K0 584 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 OR1A1Q9P1Q5 309 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 ZNF580Q9UK33 172 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 WSB1Q9Y6I7 421 aa12.2□□□□□ -0.46
CLIC3-201ENST00000473911 FOXI3A8MTJ6 420 aaPredicted RBP12.19□□□□□ -0.46
CLIC3-201ENST00000473911 H7C2Y5 167 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 ATP6V0E1O15342 81 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 HLA-DRB1P01911 266 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 MYL9P24844 172 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 TMEM50BP56557 158 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 KIR2DS1Q14954 304 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 PLGLAQ15195 96 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 SSX1Q16384 188 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 GLDNQ6ZMI3 551 aaPredicted RBP12.19□□□□□ -0.46
CLIC3-201ENST00000473911 NPBQ8NG41 125 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 CHCHD6Q9BRQ6 235 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 GHITMQ9H3K2 345 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 RAB22AQ9UL26 194 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 RAB26Q9ULW5 256 aa12.19□□□□□ -0.46
CLIC3-201ENST00000473911 TMEM272A0A1B0GTI8 110 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 WI2-2373I1.2A0A1W2PRP0 233 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 OR5H14A6NHG9 310 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 G3V318 75 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 ITGB1BP1O14713 200 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 GSTP1P09211 210 aaKnown RBP12.18□□□□□ -0.46
CLIC3-201ENST00000473911 SCTP09683 121 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 CT45A6P0DMU7 189 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 CT45A5P0DMU8 189 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 CT45A7P0DMV0 189 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 PSMB8P28062 276 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 MC5RP33032 325 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 EGFEM1PQ0D2K5 195 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 VAX1Q5SQQ9 334 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 OR5M8Q8NGP6 311 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 C4orf3Q8WVX3 66 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 C11orf54Q9H0W9 315 aaPredicted RBP12.18□□□□□ -0.46
CLIC3-201ENST00000473911 ZNF221Q9UK13 617 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 RNF150Q9ULK6 438 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 WASHC3Q9Y3C0 194 aa12.18□□□□□ -0.46
CLIC3-201ENST00000473911 IGHV7-81A0A0B4J1V7 117 aa12.17□□□□□ -0.46
CLIC3-201ENST00000473911 TRAV1-2A0A0B4J238 106 aa12.17□□□□□ -0.46
CLIC3-201ENST00000473911 TRAV41A0A0B4J266 112 aa12.17□□□□□ -0.46
CLIC3-201ENST00000473911 TRDCB7Z8K6 153 aa12.17□□□□□ -0.46
CLIC3-201ENST00000473911 H0YJW9 148 aa12.17□□□□□ -0.46
CLIC3-201ENST00000473911 NDUFA3O95167 84 aa12.17□□□□□ -0.46
CLIC3-201ENST00000473911 CD3GP09693 182 aa12.17□□□□□ -0.46
CLIC3-201ENST00000473911 OR10A3P58181 314 aa12.17□□□□□ -0.46
CLIC3-201ENST00000473911 PLA2G7Q13093 441 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms