RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 KIR3DL3Q8N743 410 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.42□□□□□ -0.42
COL4A5-203ENST00000470339 ZNF439Q8NDP4 499 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 ZNF596Q8TC21 504 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 PSG11Q9UQ72 335 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 SESN1Q9Y6P5 492 aa12.42□□□□□ -0.42
COL4A5-203ENST00000470339 HECTD1Q9ULT8 2610 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 PIGBOS1A0A0B4J2F0 54 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 RNF212BA8MTL3 300 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 C22orf46C9J442 243 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 ENSAO43768 121 aaKnown RBP12.41□□□□□ -0.42
COL4A5-203ENST00000470339 HLA-GP17693 338 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 ZNF134P52741 427 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 CLEC12BQ2HXU8 276 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 CT45A1Q5HYN5 189 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 SLC25A48Q6ZT89 311 aaKnown RBP12.41□□□□□ -0.42
COL4A5-203ENST00000470339 TBC1D26Q86UD7 250 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 AKAP14Q86UN6 197 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 LINC00311Q8N616 119 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 CT45A3Q8NHU0 189 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 COQ8AQ8NI60 647 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 ABHD14AQ9BUJ0 271 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 OR2D2Q9H210 308 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 KCNS2Q9ULS6 477 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 ARHGAP32A7KAX9 2087 aa12.41□□□□□ -0.42
COL4A5-203ENST00000470339 ABCA12Q86UK0 2595 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 IGHV4-30-2A0A087WSY4 118 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 C3orf85A0A1B0GTC6 90 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 DBX1A6NMT0 343 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 RAB29O14966 203 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 CCNKO75909 580 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 F2RP25116 425 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 GPR12P47775 334 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 SRPXP78539 464 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 PAX2Q02962 417 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 EIF4EBP1Q13541 118 aaPredicted RBP12.4□□□□□ -0.42
COL4A5-203ENST00000470339 FCN2Q15485 313 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 PRSS57Q6UWY2 283 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 ZNF66Q6ZN08 573 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 TCTEX1D1Q8N7M0 179 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 LRTM2Q8N967 370 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 ASB13Q8WXK3 278 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 TNFRSF14Q92956 283 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 HSD17B10Q99714 261 aaKnown RBP12.4□□□□□ -0.42
COL4A5-203ENST00000470339 TMEM133Q9H2Q1 129 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 IFI27L2Q9H2X8 130 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 FAM212BQ9NTI7 297 aaPredicted RBP12.4□□□□□ -0.42
COL4A5-203ENST00000470339 PIPOXQ9P0Z9 390 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 RNF150Q9ULK6 438 aa12.4□□□□□ -0.42
COL4A5-203ENST00000470339 IGHV4-61A0A0C4DH41 118 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 H0Y980 276 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 ST8SIA5O15466 376 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 ZFP36P26651 326 aaKnown RBP12.39□□□□□ -0.43
COL4A5-203ENST00000470339 ERVFRD-1P60508 538 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 TMEM187Q14656 261 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 SLC9A3R2Q15599 337 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 OR11H7Q8NGC8 314 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 OR9G1Q8NH87 305 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 CASTOR1Q8WTX7 329 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 GLYATL2Q8WU03 294 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 UNKLQ9H9P5 680 aaKnown RBP12.39□□□□□ -0.43
COL4A5-203ENST00000470339 SDHAF2Q9NX18 166 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 KPTNQ9Y664 436 aa12.39□□□□□ -0.43
COL4A5-203ENST00000470339 IGHV2-70DA0A0C4DH43 119 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 J3QR06 171 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 OR5AC1P0C628 307 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 UCP1P25874 307 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 PRRX1P54821 245 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 ANKRD55Q3KP44 614 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 LIAT1Q6ZQX7 453 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 LGI3Q8N145 548 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 UXS1Q8NBZ7 420 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 LEAP2Q969E1 77 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 ABHD14BQ96IU4 210 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 TMEM56Q96MV1 263 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 TMEM222Q9H0R3 208 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 METTL8Q9H825 291 aaKnown RBP12.38□□□□□ -0.43
COL4A5-203ENST00000470339 RAB18Q9NP72 206 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 LIN7CQ9NUP9 197 aaKnown RBP12.38□□□□□ -0.43
COL4A5-203ENST00000470339 ONECUT1Q9UBC0 465 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 MGAT4CQ9UBM8 478 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 TMEM56-RWDD3S4R434 201 aa12.38□□□□□ -0.43
COL4A5-203ENST00000470339 SLC31A2O15432 143 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 OR2A4O95047 310 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 CXCL3P19876 107 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 USF1P22415 310 aaPredicted RBP12.37□□□□□ -0.43
COL4A5-203ENST00000470339 PRTN3P24158 256 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 CATR1Q13166 79 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 UTF1Q5T230 341 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 HIST2H2BCQ6DN03 193 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 LIN54Q6MZP7 749 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 FAM71F2Q6NXP2 309 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 ODF3L1Q8IXM7 274 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 ABHD12Q8N2K0 398 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 Q8N7P7 452 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 MSI2Q96DH6 328 aaKnown RBP12.37□□□□□ -0.43
COL4A5-203ENST00000470339 C1orf159Q96HA4 380 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 ST6GAL2Q96JF0 529 aa12.37□□□□□ -0.43
COL4A5-203ENST00000470339 OR2A7Q96R45 310 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms