RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ANAPC10Q9UM13 185 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 CELSR1Q9NYQ6 3014 aa3.88□□□□□ -1.79
SF3B1-208ENST00000470268 MEIKINA0A087WXM9 373 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 TRBV6-6A0A0A6YYG2 114 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 IGKV1-6A0A0C4DH72 117 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 ODAMA1E959 279 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 FAM172BPA6NC97 362 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 HMX3A6NHT5 357 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 C12orf77C9JDV5 145 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 C15orf65H3BRN8 121 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 MMP23AO75900 390 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 SCTP09683 121 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 SLC25A16P16260 332 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 CCL3L1P16619 93 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 OMGP23515 440 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 ERP29P30040 261 aaKnown RBP3.87□□□□□ -1.79
SF3B1-208ENST00000470268 SSTR5P35346 364 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 KCNJ3P48549 501 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 DLX1P56177 255 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 GNB2P62879 340 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 RPL31P62899 125 aaKnown RBP3.87□□□□□ -1.79
SF3B1-208ENST00000470268 LCN2P80188 198 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 HERPUD1Q15011 391 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 ARL6IP1Q15041 203 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 C2orf68Q2NKX9 166 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 LRRC10Q5BKY1 277 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 SLC35E4Q6ICL7 350 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 BAIAP2L2Q6UXY1 529 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 OR8B3Q8NGG8 313 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 OR51S1Q8NGJ8 323 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 OR5D13Q8NGL4 314 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 MRGPRDQ8TDS7 321 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 H1FXQ92522 213 aaKnown RBP3.87□□□□□ -1.79
SF3B1-208ENST00000470268 CREB3L1Q96BA8 519 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 OR8B2Q96RD0 313 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 ST6GALNAC5Q9BVH7 336 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 SLC25A32Q9H2D1 315 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 DPAGT1Q9H3H5 408 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 GHITMQ9H3K2 345 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 NCOR1P1Q9H4R4 102 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 LPAR2Q9HBW0 351 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 Q9N2K0 584 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 MMP26Q9NRE1 261 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 RPUSD1Q9UJJ7 312 aaKnown RBP3.87□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF221Q9UK13 617 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 ARID1AO14497 2285 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 TMEM30CPA0ZSE6 113 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 A8MXK9 166 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 SULT1C2O00338 296 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 RBBP9O75884 186 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 USF1P22415 310 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-208ENST00000470268 DTYMKP23919 212 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 GLP1RP43220 463 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 DLX6P56179 175 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 MRPS10P82664 201 aaKnown RBP3.87□□□□□ -1.79
SF3B1-208ENST00000470268 PRB3Q04118 309 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-208ENST00000470268 C17orf58Q2M2W7 97 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 ESCO2Q56NI9 601 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 IGSF11Q5DX21 431 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 HOGA1Q86XE5 327 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 LY6G5BQ8NDX9 201 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 RFESDQ8TAC1 157 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 MRGPRFQ96AM1 343 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 REG4Q9BYZ8 158 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 SCPEP1Q9HB40 452 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 TAF9BQ9HBM6 251 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 CHMP1AQ9HD42 196 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-208ENST00000470268 PPP1R14DQ9NXH3 145 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 TRAPPC2LQ9UL33 140 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 BAHCC1Q9P281 2608 aa3.87□□□□□ -1.79
SF3B1-208ENST00000470268 PRRC2AP48634 2157 aaKnown RBP3.86□□□□□ -1.79
SF3B1-208ENST00000470268 CENPXA8MT69 81 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 NPIPB11E5RHQ5 1161 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 SDCBPO00560 298 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-208ENST00000470268 SIX6O95475 246 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 HBZP02008 142 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 PMP2P02689 132 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF735P0CB33 412 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 EGR2P11161 476 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-208ENST00000470268 NPY4RP50391 375 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 RRAS2P62070 204 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-208ENST00000470268 MEF2CQ06413 473 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-208ENST00000470268 LOXL1Q08397 574 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-208ENST00000470268 HMGN3Q15651 99 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 ZFP69Q49AA0 526 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 SCGB2B2Q4G0G5 96 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF782Q6ZMW2 699 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-208ENST00000470268 Q6ZS49 121 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 FAM185AQ8N0U4 392 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 Q8N7P7 452 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF565Q8N9K5 539 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 OR11H4Q8NGC9 324 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 OR1L1Q8NH94 360 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 GRPEL2Q8TAA5 225 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 C8orf46Q8TAG6 207 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 ABHD5Q8WTS1 349 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 C15orf40Q8WUR7 153 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 CORO2AQ92828 525 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 RAB39BQ96DA2 213 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 SLC6A7Q99884 636 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms