RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 C8orf46Q8TAG6 207 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 TWIST2Q8WVJ9 160 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 CRYGNQ8WXF5 182 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 RDH5Q92781 318 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 NEUROG1Q92886 237 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 TMEM54Q969K7 222 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 CLDN23Q96B33 292 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 SEC22AQ96IW7 307 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 LINC00477Q96M19 166 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 LINC01587Q99440 93 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 MCHR1Q99705 422 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 SLC25A21Q9BQT8 299 aaPredicted RBP4.32□□□□□ -1.72
COL3A1-205ENST00000470167 RHNO1Q9BSD3 238 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 NDC1Q9BTX1 674 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 GABARAPL3Q9BY60 117 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 TBC1D17Q9HA65 648 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 ST20Q9HBF5 79 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 IL36GQ9NZH8 169 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF581Q9P0T4 197 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 KLHL13Q9P2N7 655 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 GNG12Q9UBI6 72 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 RARRES3Q9UL19 164 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 ABT1Q9ULW3 272 aaKnown RBP4.32□□□□□ -1.72
COL3A1-205ENST00000470167 COQ4Q9Y3A0 265 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 SOX21Q9Y651 276 aaPredicted RBP4.32□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF106Q9H2Y7 1883 aaKnown RBP4.32□□□□□ -1.72
COL3A1-205ENST00000470167 TET3O43151 1660 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 ANKRD31Q8N7Z5 1873 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 TRBV6-7A0A0A0MS04 114 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 A0A1W2PP11 408 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 A0A1W2PS29 197 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 C9orf118A6NHY6 69 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 H3BRM9 83 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 GABARAPH6UMI1 98 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 CRXO43186 299 aaPredicted RBP4.31□□□□□ -1.72
COL3A1-205ENST00000470167 PLPP2O43688 288 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 PROSCO94903 275 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 NKX2-2O95096 273 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 PMS2P2O95744 297 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 TBX6O95947 436 aaPredicted RBP4.31□□□□□ -1.72
COL3A1-205ENST00000470167 OXTP01178 125 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 TNFP01375 233 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 REG1AP05451 166 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 LINC00869P0C866 280 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 LINC00694P0DN24 101 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 IRF1P10914 325 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 LYL1P12980 280 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 GP9P14770 177 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 TAL1P17542 331 aaPredicted RBP4.31□□□□□ -1.72
COL3A1-205ENST00000470167 GCSHP23434 173 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 CRYBB3P26998 211 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 SRP14P37108 136 aaKnown RBP4.31□□□□□ -1.72
COL3A1-205ENST00000470167 CA7P43166 264 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 POLR2JP52435 117 aaKnown RBP4.31□□□□□ -1.72
COL3A1-205ENST00000470167 PGGT1BP53609 377 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 GNG5P63218 68 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 DGCR2P98153 550 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF92Q03936 586 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 RAB40BQ12829 278 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 TCEAL5Q5H9L2 206 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 C11orf87Q6NUJ2 197 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 ANKRD16Q6P6B7 361 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 STAC2Q6ZMT1 411 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 Q6ZS92 163 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 DTX2Q86UW9 622 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 C1orf158Q8N1D5 194 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 TEX29Q8N6K0 151 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF709Q8N972 641 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 Q8N976 141 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 TMEM229BQ8NBD8 167 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF548Q8NEK5 533 aaPredicted RBP4.31□□□□□ -1.72
COL3A1-205ENST00000470167 OR51G1Q8NGK1 321 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 OR5AR1Q8NGP9 310 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 OR1L3Q8NH93 324 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 ATP6V0E2Q8NHE4 81 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 PPTC7Q8NI37 304 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 PLPPR1Q8TBJ4 325 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 OVCA2Q8WZ82 227 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 DDIT4LQ96D03 193 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 RTBDNQ9BSG5 229 aaPredicted RBP4.31□□□□□ -1.72
COL3A1-205ENST00000470167 SPANXDQ9BXN6 97 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 PNRC2Q9NPJ4 139 aaKnown RBP4.31□□□□□ -1.72
COL3A1-205ENST00000470167 ACER3Q9NUN7 267 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 TMEM30AQ9NV96 361 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 IL36AQ9UHA7 158 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 RCL1Q9Y2P8 373 aaKnown RBP4.31□□□□□ -1.72
COL3A1-205ENST00000470167 STRCP1A6NGW2 1772 aa4.31□□□□□ -1.72
COL3A1-205ENST00000470167 COL3A1P02461 1466 aaPredicted RBP4.3□□□□□ -1.72
COL3A1-205ENST00000470167 PKD1L3Q7Z443 1732 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 C5P01031 1676 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 NSG1A0A0A6YYJ2 146 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 A0A1B0GTL3 188 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.3□□□□□ -1.72
COL3A1-205ENST00000470167 TCRBV9S1A1TA0A576 114 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 OR51F1A6NGY5 319 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 C3orf70A6NLC5 250 aaPredicted RBP4.3□□□□□ -1.72
COL3A1-205ENST00000470167 F8W1H4 67 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 NPFFO15130 113 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF354AO60765 605 aaPredicted RBP4.3□□□□□ -1.72
COL3A1-205ENST00000470167 TBL1XO60907 577 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms