RNA–Protein interactions for RNA: ENST00000470019.5

PTK7-208, Transcript of protein tyrosine kinase 7 (inactive), human

TSL 5

Gene PTK7, Length 4,016 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK7-208	ENST00000470019	RTL8B	Q17RB0	113 aa		12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	RBMS3	Q6XE24	437 aa	Known RBP	12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	IL34	Q6ZMJ4	242 aa		12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	ISOC2	Q96AB3	205 aa		12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	AQP10	Q96PS8	301 aa		12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	BIN3	Q9NQY0	253 aa		12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	RPH3AL	Q9UNE2	315 aa		12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	LAMP3	Q9UQV4	416 aa		12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	APELA	P0DMC3	54 aa		12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	HNF1A	P20823	631 aa		12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	STUM	Q69YW2	141 aa		12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	LHFPL1	Q86WI0	220 aa		12.52	□□□□□ -0.41
PTK7-208	ENST00000470019	CD3E	P07766	207 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	NAT1	P18440	290 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	HFE	Q30201	348 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	NECAP1	Q8NC96	275 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	OR4F5	Q8NH21	305 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	DTD1	Q8TEA8	209 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	OR4F4	Q96R69	305 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	LRFN3	Q9BTN0	628 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	ASCL3	Q9NQ33	180 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	REV3L	O60673	3130 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019		H0Y980	276 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	SLC25A6	P12236	298 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	MUC1	P15941	1255 aa	Predicted RBP	12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	RAB5C	P51148	216 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	RPL31	P62899	125 aa	Known RBP	12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	TMEM42	Q69YG0	159 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	ETV3L	Q6ZN32	361 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	FRZB	Q92765	325 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	hADV38S2	A0JD32	116 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	ZNF727	A8MUV8	499 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	PSMB3	P49720	205 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	OR5D13	Q8NGL4	314 aa		12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	CIB3	Q96Q77	187 aa	Predicted RBP	12.51	□□□□□ -0.41
PTK7-208	ENST00000470019	NOTCH3	Q9UM47	2321 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	MGST3	O14880	152 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	CNIH1	O95406	144 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	MT-CO2	P00403	227 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	DVL1P1	P54792	670 aa	Predicted RBP	12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	OR13A1	Q8NGR1	328 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	SAT2	Q96F10	170 aa	Predicted RBP	12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	MED9	Q9NWA0	146 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	CFAP54	Q96N23	3096 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	NOTCH2	Q04721	2471 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	MFSD2B	A6NFX1	497 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	PTBP3	O95758	552 aa	Known RBP	12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	HOXB1	P14653	301 aa	Predicted RBP	12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	STARD4	Q96DR4	205 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	ACY3	Q96HD9	319 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	FAM117A	Q9C073	453 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	MMP24	Q9Y5R2	645 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	WSB1	Q9Y6I7	421 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	LRP4	O75096	1905 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	COL6A3	P12111	3177 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	RAB19	A4D1S5	217 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	PPIH	O43447	177 aa	Known RBP	12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	KIAA0141	Q14154	515 aa	Predicted RBP	12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	FFAR4	Q5NUL3	377 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	TIMM23B	Q5SRD1	257 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	LINC01560	Q8TB33	94 aa		12.5	□□□□□ -0.41
PTK7-208	ENST00000470019	IGHV1-18	A0A0C4DH31	117 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	CYB5B	O43169	146 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	PSPN	O60542	156 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	S1PR2	O95136	353 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	ARG1	P05089	322 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	SELL	P14151	372 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	ACP7	Q6ZNF0	438 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	MOB3B	Q86TA1	216 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	C22orf15	Q8WYQ4	148 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	GTF3A	Q92664	365 aa	Known RBP	12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	SPSB4	Q96A44	273 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	MSI2	Q96DH6	328 aa	Known RBP	12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	MALRD1	Q5VYJ5	2156 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	TRAV38-1	A0A0B4J264	116 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019		A0A1B0GU03	582 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	TRIM77	I1YAP6	450 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	GALNT14	Q96FL9	552 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	ZNF665	Q9H7R5	613 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	SERTAD4	Q9NUC0	356 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	OR2C1	O95371	312 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	COX5A	P20674	150 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	SULT1A1	P50225	295 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	RAB4B	P61018	213 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	AVPI1	Q5T686	147 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	UQCC3	Q6UW78	93 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	C20orf204	Q6ZNR8	217 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	TLNRD1	Q9H1K6	362 aa		12.49	□□□□□ -0.41
PTK7-208	ENST00000470019	NUDT19	A8MXV4	375 aa		12.48	□□□□□ -0.41
PTK7-208	ENST00000470019	PGA5	P0DJD9	388 aa		12.48	□□□□□ -0.41
PTK7-208	ENST00000470019	UCP3	P55916	312 aa		12.48	□□□□□ -0.41
PTK7-208	ENST00000470019	LHFPL5	Q8TAF8	219 aa		12.48	□□□□□ -0.41
PTK7-208	ENST00000470019	ATP5S	Q99766	215 aa		12.48	□□□□□ -0.41
PTK7-208	ENST00000470019	LIME1	Q9H400	295 aa		12.48	□□□□□ -0.41
PTK7-208	ENST00000470019	SLC35D1	Q9NTN3	355 aa		12.48	□□□□□ -0.41
PTK7-208	ENST00000470019	GLRX	P35754	106 aa		12.48	□□□□□ -0.41
PTK7-208	ENST00000470019	FAM216B	Q8N7L0	139 aa		12.48	□□□□□ -0.41
PTK7-208	ENST00000470019	SSMEM1	Q8WWF3	244 aa		12.48	□□□□□ -0.41
PTK7-208	ENST00000470019	BSCL2	Q96G97	398 aa	Predicted RBP	12.48	□□□□□ -0.41
PTK7-208	ENST00000470019	IGHV3-72	A0A0B4J1Y9	119 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms