RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 C14orf166Q9Y224 244 aaKnown RBP6.64□□□□□ -1.35
HDAC6-216ENST00000468949 FAM96BQ9Y3D0 163 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 OR2W1Q9Y3N9 320 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 VPS13CQ709C8 3753 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 MALRD1Q5VYJ5 2156 aa6.64□□□□□ -1.35
HDAC6-216ENST00000468949 IGHV3OR16-10A0A075B7F0 116 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 A0A087X0M5 115 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 IGHV1-69DA0A0B4J2H0 117 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 FAM240BA0A1B0GVZ2 78 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 A0A1B0GX30 115 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 A0A1W2PPE3 182 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 J3QR06 171 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 RAB29O14966 203 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 IGHV1-69P01742 117 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 OR8U9P0C7N5 309 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 EPHA1P21709 976 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 HTR1DP28221 377 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 CD34P28906 385 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 UBE2E1P51965 193 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 DLX1P56177 255 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 LOXL3P58215 753 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 CBX3Q13185 183 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 RBMS2Q15434 407 aaKnown RBP6.63□□□□□ -1.35
HDAC6-216ENST00000468949 HLA-DRB5Q30154 266 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 C11orf88Q6PI97 169 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 IDO2Q6ZQW0 420 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 C5orf24Q7Z6I8 188 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 LYSMD2Q8IV50 215 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 CMTM1Q8IZ96 169 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 SLC38A6Q8IZM9 456 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 C8orf31Q8N9H6 132 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 BEND2Q8NDZ0 799 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 OR4D10Q8NGI6 311 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 OR51S1Q8NGJ8 323 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 OR8U1Q8NH10 309 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 ZFAND1Q8TCF1 268 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 GIMAP1Q8WWP7 306 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 MOB3AQ96BX8 217 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 DPAGT1Q9H3H5 408 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 GHITMQ9H3K2 345 aa6.63□□□□□ -1.35
HDAC6-216ENST00000468949 TBL2Q9Y4P3 447 aaKnown RBP6.63□□□□□ -1.35
HDAC6-216ENST00000468949 ZFHX3Q15911 3703 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 NIPBLQ6KC79 2804 aaeCLIP6.62□□□□□ -1.35
HDAC6-216ENST00000468949 RNF212BA8MTL3 300 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 LEUTXA8MZ59 168 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 RNASEK-C17orf49H0YIS7 233 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 ITGB1BP1O14713 200 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 HSD17B6O14756 317 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 NPFFO15130 113 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 TXNL1O43396 289 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 TUSC2O75896 110 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 BPIFB3P59826 476 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 ASAH1Q13510 395 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 MIDNQ504T8 468 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 PLA1AQ53H76 456 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 LY6G6FQ5SQ64 297 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 SAMD5Q5TGI4 173 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 MINOS1Q5TGZ0 78 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 ZNF626Q68DY1 528 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 CCDC144NLQ6NUI1 221 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 SLC25A48Q6ZT89 311 aaKnown RBP6.62□□□□□ -1.35
HDAC6-216ENST00000468949 TGIF2LXQ8IUE1 241 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 ZNF645Q8N7E2 425 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 CCDC71LQ8N9Z2 235 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-216ENST00000468949 OR11H6Q8NGC7 330 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 TERB2Q8NHR7 220 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 SLC25A21Q9BQT8 299 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-216ENST00000468949 FXYD6Q9H0Q3 95 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 C11orf54Q9H0W9 315 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-216ENST00000468949 SLC2A8Q9NY64 477 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 COPZ2Q9P299 210 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 DPM3Q9P2X0 92 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 NUP50Q9UKX7 468 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 RNF150Q9ULK6 438 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 MINOS1-NBL1R4GNA1 71 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 NAV3Q8IVL0 2385 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 CSPG4Q6UVK1 2322 aa6.62□□□□□ -1.35
HDAC6-216ENST00000468949 ANK3Q12955 4377 aaKnown RBP6.62□□□□□ -1.35
HDAC6-216ENST00000468949 TLN2Q9Y4G6 2542 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 ZANQ9Y493 2812 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 SAA2-SAA4A0A096LPE2 208 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 CENPVL3A0A0U1RRI6 287 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 BTBD17A6NE02 478 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 ODF3BA8MYP8 253 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 BUB1B-PAK6H3BSN5 160 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 M0R1X1 148 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 GPR31O00270 319 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 SLC31A2O15432 143 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 CRLF1O75462 422 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 APOA2P02652 100 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 RLN1P04808 185 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 FBP1P09467 338 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 SAA2P0DJI9 122 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-216ENST00000468949 SAA4P35542 130 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 BAMBIQ13145 260 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 CATR1Q13166 79 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 SURF2Q15527 256 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-216ENST00000468949 RGS21Q2M5E4 152 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 CT45A1Q5HYN5 189 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms