RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 IL3RAP26951 378 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 CD1BP29016 333 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 VEGFCP49767 419 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 GNMTQ14749 295 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 TMEM95Q3KNT9 176 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 ABCA11PQ4W5N1 156 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 TEPPQ6URK8 271 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 MOB1BQ7L9L4 216 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 C5orf56Q8N8D9 126 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 OR52L2PQ8NGH6 319 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 OR56B1Q8NGI3 324 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 OR10V1Q8NGI7 309 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 GALMQ96C23 342 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 PECRQ9BY49 303 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 PLSCR3Q9NRY6 295 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 C19orf73Q9NVV2 129 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 AK3Q9UIJ7 227 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 STUB1Q9UNE7 303 aa8.85□□□□□ -0.99
COL4A6-205ENST00000468338 IGKV1D-33P01593 117 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 IGKV1-33P01594 117 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 PPP1CCP36873 323 aaKnown RBP8.84□□□□□ -0.99
COL4A6-205ENST00000468338 VDAC2P45880 294 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-205ENST00000468338 REG1BP48304 166 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 CD83Q01151 205 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 C2orf68Q2NKX9 166 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 MOGAT2Q3SYC2 334 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 ETV3LQ6ZN32 361 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 TPRA1Q86W33 373 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 HDHD3Q9BSH5 251 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-205ENST00000468338 ABHD14AQ9BUJ0 271 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 Q9N2K0 584 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 C12orf4Q9NQ89 552 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 MGAT4AQ9UM21 535 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 NOTCH1P46531 2555 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 PLXNB1O43157 2135 aa8.84□□□□□ -0.99
COL4A6-205ENST00000468338 IGHV3-72A0A0B4J1Y9 119 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 ZNF736B4DX44 427 aaPredicted RBP8.83□□□□□ -1
COL4A6-205ENST00000468338 MFNGO00587 321 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 RGS11O94810 467 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 CD28P10747 220 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 TMEM11P17152 192 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 HES1Q14469 280 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 HNF4GQ14541 408 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 TCTEX1D4Q5JR98 221 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 ZNF833PQ6ZTB9 187 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 MOB3BQ86TA1 216 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 TGIF2LXQ8IUE1 241 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 LYG1Q8N1E2 194 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 C11orf44Q8N8P7 122 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 OR10R2Q8NGX6 335 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 OR2T10Q8NGZ9 312 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 ZNF251Q9BRH9 671 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 AGMATQ9BSE5 352 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 TOLLIPQ9H0E2 274 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 OR51E2Q9H255 320 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 IFI27L2Q9H2X8 130 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 ABRACLQ9P1F3 81 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 SSR3Q9UNL2 185 aa8.83□□□□□ -1
COL4A6-205ENST00000468338 A0A0B4J203 849 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 IGKV1-6A0A0C4DH72 117 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 SH2D7A6NKC9 451 aaPredicted RBP8.82□□□□□ -1
COL4A6-205ENST00000468338 TRIM64CA6NLI5 447 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 MOSP00540 346 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 IGHG2P01859 326 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 CSF1P09603 554 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 SCTP09683 121 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 SLC2A2P11168 524 aaPredicted RBP8.82□□□□□ -1
COL4A6-205ENST00000468338 HLA-DRB3P79483 266 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 HIST2H2BDQ6DRA6 164 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 FAM71F2Q6NXP2 309 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 NDUFA11Q86Y39 141 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 Q8N9W7 124 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 OR2AK2Q8NG84 335 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 OR5AU1Q8NGC0 362 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 OR8H1Q8NGG4 311 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 RAB3CQ96E17 227 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 KCTD7Q96MP8 289 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 CITED2Q99967 270 aaPredicted RBP8.82□□□□□ -1
COL4A6-205ENST00000468338 NABP2Q9BQ15 211 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 CMSS1Q9BQ75 279 aaKnown RBP8.82□□□□□ -1
COL4A6-205ENST00000468338 GHITMQ9H3K2 345 aa8.82□□□□□ -1
COL4A6-205ENST00000468338 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.82□□□□□ -1
COL4A6-205ENST00000468338 SAA2-SAA4A0A096LPE2 208 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 METTL21EPA6NDL7 271 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 SERPINE3A8MV23 424 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 DIRAS3O95661 229 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 SAA2P0DJI9 122 aaPredicted RBP8.81□□□□□ -1
COL4A6-205ENST00000468338 HIST1H1DP16402 221 aaKnown RBP8.81□□□□□ -1
COL4A6-205ENST00000468338 CD36P16671 472 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 GADD45AP24522 165 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 SDC2P34741 201 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 NEDD8Q15843 81 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 SRSF7Q16629 238 aaKnown RBP eCLIP8.81□□□□□ -1
COL4A6-205ENST00000468338 Q6ZS49 121 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 FAM71E2Q8N5Q1 922 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 IL1F10Q8WWZ1 152 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 PARP12Q9H0J9 701 aaKnown RBP8.81□□□□□ -1
COL4A6-205ENST00000468338 ABCG5Q9H222 651 aa8.81□□□□□ -1
COL4A6-205ENST00000468338 CHMP1AQ9HD42 196 aaPredicted RBP8.81□□□□□ -1
COL4A6-205ENST00000468338 LIN7CQ9NUP9 197 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms