RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 IGHG2P01859 326 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 SERPINE1P05121 402 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 PFN1P07737 140 aaKnown RBP2.62□□□□□ -1.99
VPS50-209ENST00000467326 BPGMP07738 259 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 TDGF1P13385 188 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 CTLA4P16410 223 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 HSPA9P38646 679 aaKnown RBP2.62□□□□□ -1.99
VPS50-209ENST00000467326 TDGF1P3P51864 188 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 MP68P56378 58 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 LCN6P62502 163 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 GRB2P62993 217 aaKnown RBP2.62□□□□□ -1.99
VPS50-209ENST00000467326 RUNX1Q01196 453 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 FABP9Q0Z7S8 132 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 IL15RAQ13261 267 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 JOSD1Q15040 202 aaPredicted RBP2.62□□□□□ -1.99
VPS50-209ENST00000467326 CLLU1OSQ5K130 101 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 CASC10Q5T4H9 136 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 ALKAL1Q6UXT8 129 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
VPS50-209ENST00000467326 LINC00596Q86U02 117 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 ANKRD29Q8N6D5 301 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 GDPD1Q8N9F7 314 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 OR8J3Q8NGG0 315 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 OR5J2Q8NH18 312 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 ABHD3Q8WU67 409 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 MBD3L1Q8WWY6 194 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 TMEM203Q969S6 136 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 GPR146Q96CH1 333 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 MALSU1Q96EH3 234 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 LINC00477Q96M19 166 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 LINC00167Q96N53 147 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 RNF157Q96PX1 679 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 OR52B2Q96RD2 323 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 TIMM17AQ99595 171 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 HSPB9Q9BQS6 159 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 VPS25Q9BRG1 176 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 SEC22CQ9BRL7 303 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 EFCAB11Q9BUY7 163 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 TBL1XR1Q9BZK7 514 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 COMMD5Q9GZQ3 224 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 LINC00527Q9UJ94 153 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 F11RQ9Y624 299 aaKnown RBP2.62□□□□□ -1.99
VPS50-209ENST00000467326 PHF3Q92576 2039 aaKnown RBP2.61□□□□□ -1.99
VPS50-209ENST00000467326 SOGA1O94964 1423 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 SETD5Q9C0A6 1442 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 CNTLNQ9NXG0 1405 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 DENND4AQ7Z401 1863 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 BORCS7-ASMTA0A0B4J1R7 106 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 IGHV3-35A0A0C4DH35 117 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 FAM236DA0A1B0GTK5 79 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 A0A1W2PRE2 83 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 C9JQL5 133 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 TXNDC9O14530 226 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 GYG2O15488 501 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 BANF1O75531 89 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 GCM2O75603 506 aaPredicted RBP2.61□□□□□ -1.99
VPS50-209ENST00000467326 GABARAPO95166 117 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 FAM107AO95990 144 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 DBIP07108 87 aaKnown RBP2.61□□□□□ -1.99
VPS50-209ENST00000467326 SOD3P08294 240 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 FAM236CP0DP71 79 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 FGF6P10767 208 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 ZNF30P17039 623 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 CDK2P24941 298 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 INPP1P49441 399 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 CTBP2P56545 445 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 TIMM10P62072 90 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 PPP1CAP62136 330 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 SNRPD2P62316 118 aaKnown RBP2.61□□□□□ -1.99
VPS50-209ENST00000467326 GNG5P63218 68 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 CRADDP78560 199 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 CAV1Q03135 178 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 REG3AQ06141 175 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 MEF2CQ06413 473 aaPredicted RBP2.61□□□□□ -1.99
VPS50-209ENST00000467326 EGFEM1PQ0D2K5 195 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 SSX1Q16384 188 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 SCGB2B2Q4G0G5 96 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 C2orf83Q53S99 150 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 ZFAND6Q6FIF0 208 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 GLYATQ6IB77 296 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 ZNF773Q6PK81 442 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 RNF165Q6ZSG1 346 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 CLEC20AQ6ZU45 233 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 FA2HQ7L5A8 372 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 ATP5L2Q7Z4Y8 100 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 DRAM1Q8N682 238 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 OR8B12Q8NGG6 310 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 OR9Q1Q8NGQ5 310 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 OR1J4Q8NGS1 313 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 ZNF675Q8TD23 568 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 TM4SF18Q96CE8 201 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 SLC25A44Q96H78 314 aaPredicted RBP2.61□□□□□ -1.99
VPS50-209ENST00000467326 CAPZA3Q96KX2 299 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 SERPINI1Q99574 410 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 C12orf57Q99622 126 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 MND1Q9BWT6 205 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 YIPF3Q9GZM5 350 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 ZNF702PQ9H963 129 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 HMG20AQ9NP66 347 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 UQCC1Q9NVA1 299 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms