RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 TAGLN3Q9UI15 199 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 TRBV9A0A0B4J1U6 114 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 SLC16A6O15403 523 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 HTR3BO95264 441 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 GYPBP06028 91 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 T-ENOLP0DO92 83 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 HOXA1P49639 335 aaPredicted RBP4.29□□□□□ -1.72
CXXC4-202ENST00000466963 ARL6IP1Q15041 203 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 OXA1LQ15070 435 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 VMA21Q3ZAQ7 101 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 OR2AK2Q8NG84 335 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 OR9Q2Q8NGE9 314 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 OR52N1Q8NH53 320 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 OR4A5Q8NH83 315 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 FEVQ99581 238 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 LYSTQ99698 3801 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 PPIL3Q9H2H8 161 aaKnown RBP4.29□□□□□ -1.72
CXXC4-202ENST00000466963 NBEAL2Q6ZNJ1 2754 aa4.29□□□□□ -1.72
CXXC4-202ENST00000466963 TCRBV5S2A0A599 114 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 ZNF785A8K8V0 405 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 NPIPB5A8MRT5 1133 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 FUT3P21217 361 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 RPS27P42677 84 aaKnown RBP4.28□□□□□ -1.72
CXXC4-202ENST00000466963 CXCR4P61073 352 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 PRB3Q04118 309 aaPredicted RBP4.28□□□□□ -1.72
CXXC4-202ENST00000466963 TRIM25Q14258 630 aaKnown RBP4.28□□□□□ -1.72
CXXC4-202ENST00000466963 PLGLAQ15195 96 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 SPSB3Q6PJ21 355 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 C17orf53Q8N3J3 647 aaPredicted RBP4.28□□□□□ -1.72
CXXC4-202ENST00000466963 TTC9CQ8N5M4 171 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 CKLFQ9UBR5 152 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 ZAR1LA6NP61 321 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 TSPAN4O14817 238 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 HOXA4Q00056 320 aaPredicted RBP4.28□□□□□ -1.72
CXXC4-202ENST00000466963 ZNF585BQ52M93 769 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 ZNF880Q6PDB4 577 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 OSR1Q8TAX0 266 aaPredicted RBP4.28□□□□□ -1.72
CXXC4-202ENST00000466963 KLK15Q9H2R5 256 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 RNF167Q9H6Y7 350 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 PPP1R3EQ9H7J1 279 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 THYN1Q9P016 225 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 ZNF221Q9UK13 617 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 TRAPPC2LQ9UL33 140 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 EXOGQ9Y2C4 368 aaKnown RBP4.28□□□□□ -1.72
CXXC4-202ENST00000466963 IGKV1-9A0A0C4DH69 117 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 GNGT2O14610 69 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 MRPS14O60783 128 aaKnown RBP4.28□□□□□ -1.72
CXXC4-202ENST00000466963 CLUP10909 449 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 MIFP14174 115 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 NPY1RP25929 384 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 SNRPGP62308 76 aaKnown RBP4.28□□□□□ -1.72
CXXC4-202ENST00000466963 PSG5Q15238 335 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 RTL8BQ17RB0 113 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 CT45A1Q5HYN5 189 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 OR52B4Q8NGK2 314 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 CT45A3Q8NHU0 189 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 RSRP1Q9BUV0 290 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 ANKRD60Q9BZ19 345 aa4.28□□□□□ -1.72
CXXC4-202ENST00000466963 MRPS18AQ9NVS2 196 aaKnown RBP4.28□□□□□ -1.72
CXXC4-202ENST00000466963 NOTCH3Q9UM47 2321 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 CST1P01037 141 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 EGR2P11161 476 aaPredicted RBP4.27□□□□□ -1.73
CXXC4-202ENST00000466963 CD24P25063 80 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 GBX2P52951 348 aaPredicted RBP4.27□□□□□ -1.73
CXXC4-202ENST00000466963 TAS2R43P59537 309 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 UBE2KP61086 200 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 HNF4GQ14541 408 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 ATXN7L3Q14CW9 347 aaPredicted RBP4.27□□□□□ -1.73
CXXC4-202ENST00000466963 P2RY14Q15391 338 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 PVRIGQ6DKI7 326 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 MMD2Q8IY49 270 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 POM121L12Q8N7R1 296 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 GPR148Q8TDV2 347 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 SLC7A6OSQ96CW6 309 aaPredicted RBP4.27□□□□□ -1.73
CXXC4-202ENST00000466963 DUX3Q96PT4 197 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 IL4I1Q96RQ9 567 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 APOL4Q9BPW4 351 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 PGPEP1Q9NXJ5 209 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 GTF2A1LQ9UNN4 478 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 HUWE1Q7Z6Z7 4374 aaKnown RBP4.27□□□□□ -1.73
CXXC4-202ENST00000466963 IGKV1-12A0A0C4DH73 117 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 C2orf70A6NJV1 201 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 H0YJW9 148 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 IGKV1D-12P01611 117 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 HBZP02008 142 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 CRYGBP07316 175 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 GSTP1P09211 210 aaKnown RBP4.27□□□□□ -1.73
CXXC4-202ENST00000466963 MAPK3P27361 379 aaPredicted RBP4.27□□□□□ -1.73
CXXC4-202ENST00000466963 GNG10P50151 68 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 F2RL1P55085 397 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 ARPC4P59998 168 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 VN1R17PQ8TDU5 208 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 EEF1AKMT3Q96AZ1 226 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 OTULINQ96BN8 352 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 FGGYQ96C11 551 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 GABARAPL3Q9BY60 117 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 TMEM231Q9H6L2 316 aa4.27□□□□□ -1.73
CXXC4-202ENST00000466963 COL7A1Q02388 2944 aa4.26□□□□□ -1.73
CXXC4-202ENST00000466963 OR4C45A6NMZ5 311 aa4.26□□□□□ -1.73
CXXC4-202ENST00000466963 MPTX1A8MV57 137 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms