RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-209	ENST00000466763	HKR1	P10072	659 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	OR3A3	P47888	321 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	HNF4G	Q14541	408 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	RNASE12	Q5GAN4	147 aa	Known RBP	11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	LY6G6F	Q5SQ64	297 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-209	ENST00000466763		Q6ZS49	121 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	HOGA1	Q86XE5	327 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	MCFD2	Q8NI22	146 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	ST6GALNAC6	Q969X2	333 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	S1PR3	Q99500	378 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	CABLES2	Q9BTV7	478 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	RAB18	Q9NP72	206 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	C1RL	Q9NZP8	487 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	ANXA10	Q9UJ72	324 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	ZNF221	Q9UK13	617 aa		11.16	□□□□□ -0.62
UBA3-209	ENST00000466763	SAA2-SAA4	A0A096LPE2	208 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	TRBV6-7	A0A0A0MS04	114 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	RAB29	O14966	203 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	HLA-DQB1	P01920	261 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	CTXN2	P0C2S0	81 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	OR8U9	P0C7N5	309 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	FAM106CP	P0CH98	169 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	SAA2	P0DJI9	122 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	GPR12	P47775	334 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	RAG2	P55895	527 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	FOXL1	Q12952	345 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	RPL39P5	Q59GN2	51 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	CNIH2	Q6PI25	160 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	C12orf54	Q6X4T0	127 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	LAX1	Q8IWV1	398 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	OR8U1	Q8NH10	309 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	RBM38	Q9H0Z9	239 aa	Known RBP	11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	MIXL1	Q9H2W2	232 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	IFI27L2	Q9H2X8	130 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	PIPOX	Q9P0Z9	390 aa		11.15	□□□□□ -0.62
UBA3-209	ENST00000466763	COL6A5	A8TX70	2615 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	TMEM89	A2RUT3	159 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	TXNL1	O43396	289 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	LANCL1	O43813	399 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	CHST1	O43916	411 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	IGKV1D-33	P01593	117 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	IGKV1-33	P01594	117 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	TMEM11	P17152	192 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	NFYA	P23511	347 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	RPL15	P61313	204 aa	Known RBP	11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	ODF3L1	Q8IXM7	274 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	OR4F5	Q8NH21	305 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	CFHR4	Q92496	578 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	DIRAS2	Q96HU8	199 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	SLC25A33	Q9BSK2	321 aa		11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	MRPL20	Q9BYC9	149 aa	Known RBP	11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	SLIRP	Q9GZT3	109 aa	Known RBP	11.14	□□□□□ -0.63
UBA3-209	ENST00000466763	DPPA5	A6NC42	116 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	ZNF736	B4DX44	427 aa	Predicted RBP	11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	ITGB1BP1	O14713	200 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	DIRAS3	O95661	229 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	ZNF137P	P52743	207 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	RELB	Q01201	579 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	FBLN7	Q53RD9	439 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	TREML4	Q6UXN2	200 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763		Q6ZSV7	163 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	THNSL2	Q86YJ6	484 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	OR4C13	Q8NGP0	309 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	AKR1E2	Q96JD6	320 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	NPFFR1	Q9GZQ6	430 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	OR2D2	Q9H210	308 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	NDUFA13	Q9P0J0	144 aa		11.13	□□□□□ -0.63
UBA3-209	ENST00000466763	ZNF701	M0R085	212 aa	Predicted RBP	11.12	□□□□□ -0.63
UBA3-209	ENST00000466763		M0R1X1	148 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	MDK	P21741	143 aa	Predicted RBP	11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	CD1B	P29016	333 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	LUM	P51884	338 aa	Predicted RBP	11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	IL18	Q14116	193 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	CDK10	Q15131	360 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	ZNF833P	Q6ZTB9	187 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	OR2T10	Q8NGZ9	312 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	DGCR14	Q96DF8	476 aa	Known RBP	11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	RBMXL1	Q96E39	390 aa	Known RBP	11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	RBM14	Q96PK6	669 aa	Known RBP	11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	NABP2	Q9BQ15	211 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	AGMAT	Q9BSE5	352 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	GHITM	Q9H3K2	345 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	SCPEP1	Q9HB40	452 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	BEX1	Q9HBH7	125 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	NECAP2	Q9NVZ3	263 aa		11.12	□□□□□ -0.63
UBA3-209	ENST00000466763	FAM90A9P	A6NNJ1	464 aa		11.11	□□□□□ -0.63
UBA3-209	ENST00000466763	NCBP2L	A6PVI3	153 aa	Known RBP	11.11	□□□□□ -0.63
UBA3-209	ENST00000466763	SULT1C2	O00338	296 aa		11.11	□□□□□ -0.63
UBA3-209	ENST00000466763	OR2F2	O95006	317 aa		11.11	□□□□□ -0.63
UBA3-209	ENST00000466763	NDUFA7	O95182	113 aa		11.11	□□□□□ -0.63
UBA3-209	ENST00000466763	MOS	P00540	346 aa		11.11	□□□□□ -0.63
UBA3-209	ENST00000466763	PMP2	P02689	132 aa		11.11	□□□□□ -0.63
UBA3-209	ENST00000466763	OR5H8	P0DN80	308 aa		11.11	□□□□□ -0.63
UBA3-209	ENST00000466763	HLA-DMA	P28067	261 aa		11.11	□□□□□ -0.63

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