RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 OCM2P0CE71 109 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 OCMP0CE72 109 aaPredicted RBP11.14□□□□□ -0.63
CXCR4-203ENST00000466288 CCR9P51686 369 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 CEACAM19Q7Z692 300 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 OR5D18Q8NGL1 313 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 MRGPRDQ8TDS7 321 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 RTN4IP1Q8WWV3 396 aaPredicted RBP11.14□□□□□ -0.63
CXCR4-203ENST00000466288 ARPC1AQ92747 370 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 SPSB1Q96BD6 273 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 SPACA5Q96QH8 159 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 ALX4Q9H161 411 aaPredicted RBP11.14□□□□□ -0.63
CXCR4-203ENST00000466288 OR51J1Q9H342 316 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 GHITMQ9H3K2 345 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 ZCCHC4Q9H5U6 513 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 DAPK2Q9UIK4 370 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 WSB1Q9Y6I7 421 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 TRAV24A0A0B4J272 114 aa11.13□□□□□ -0.63
CXCR4-203ENST00000466288 FAM90A10PA6NDY2 464 aa11.13□□□□□ -0.63
CXCR4-203ENST00000466288 TMEM212A6NML5 194 aa11.13□□□□□ -0.63
CXCR4-203ENST00000466288 E9PI62 339 aa11.13□□□□□ -0.63
CXCR4-203ENST00000466288 G3V318 75 aa11.13□□□□□ -0.63
CXCR4-203ENST00000466288 RAB9AP51151 201 aa11.13□□□□□ -0.63
CXCR4-203ENST00000466288 PSMD7P51665 324 aa11.13□□□□□ -0.63
CXCR4-203ENST00000466288 MXD1Q05195 221 aa11.13□□□□□ -0.63
CXCR4-203ENST00000466288 ALKBH1Q13686 389 aaKnown RBP11.13□□□□□ -0.63
CXCR4-203ENST00000466288 TP53I3Q53FA7 332 aa11.13□□□□□ -0.63
CXCR4-203ENST00000466288 RSBN1Q5VWQ0 802 aaPredicted RBP11.13□□□□□ -0.63
CXCR4-203ENST00000466288 LYSMD2Q8IV50 215 aa11.13□□□□□ -0.63
CXCR4-203ENST00000466288 TPSG1Q9NRR2 321 aa11.13□□□□□ -0.63
CXCR4-203ENST00000466288 ZNF107Q9UII5 783 aaPredicted RBP11.13□□□□□ -0.63
CXCR4-203ENST00000466288 A0A1B0GVG6 124 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 FABP12A6NFH5 140 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 APOA1P02647 267 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 UBCP0CG48 685 aaKnown RBP11.12□□□□□ -0.63
CXCR4-203ENST00000466288 KIR3DL2P43630 455 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 PAX5Q02548 391 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 HAGHQ16775 308 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 SAXO1Q8IYX7 474 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 LINC00311Q8N616 119 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 FGGYQ96C11 551 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 ABRACLQ9P1F3 81 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 HECTD4Q9Y4D8 3996 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 TRAV39A0A0B4J263 110 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 RBMY1BA6NDE4 496 aaKnown RBP11.12□□□□□ -0.63
CXCR4-203ENST00000466288 RBMY1EA6NEQ0 496 aaKnown RBP11.12□□□□□ -0.63
CXCR4-203ENST00000466288 NOTOA8MTQ0 251 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 LINC01619G3V211 115 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 CLEC2LP0C7M8 214 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 OR8U9P0C7N5 309 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 RBMY1DP0C7P1 496 aaKnown RBP11.12□□□□□ -0.63
CXCR4-203ENST00000466288 RAB3BP20337 219 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 RANBP1P43487 201 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 SCAND1P57086 179 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 PAN3Q58A45 887 aaKnown RBP11.12□□□□□ -0.63
CXCR4-203ENST00000466288 HAPLN4Q86UW8 402 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 SGPP2Q8IWX5 399 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 PLPPR1Q8TBJ4 325 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 DIRAS2Q96HU8 199 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 SOSTQ9BQB4 213 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 TOLLIPQ9H0E2 274 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 V9GYH0 126 aa11.12□□□□□ -0.63
CXCR4-203ENST00000466288 KIAA1109Q2LD37 5005 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 IGHV4OR15-8A0A075B7B6 117 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 A0A087WW49 117 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 HSPA12AO43301 675 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 PFDN1O60925 122 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 TPPPO94811 219 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 IFNA6P05013 189 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 SLC2A2P11168 524 aaPredicted RBP11.11□□□□□ -0.63
CXCR4-203ENST00000466288 IFITM3Q01628 133 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 HSD17B12Q53GQ0 312 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 LAX1Q8IWV1 398 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 OR5AK2Q8NH90 309 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 IL17DQ8TAD2 202 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 SRRQ9GZT4 340 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 MIXL1Q9H2W2 232 aa11.11□□□□□ -0.63
CXCR4-203ENST00000466288 TRBV5-5A0A0J9YX44 114 aa11.1□□□□□ -0.63
CXCR4-203ENST00000466288 ATP6V0E1O15342 81 aa11.1□□□□□ -0.63
CXCR4-203ENST00000466288 TALDO1P37837 337 aa11.1□□□□□ -0.63
CXCR4-203ENST00000466288 RPS11P62280 158 aaKnown RBP eCLIP11.1□□□□□ -0.63
CXCR4-203ENST00000466288 Q499Y3 187 aa11.1□□□□□ -0.63
CXCR4-203ENST00000466288 HACD4Q5VWC8 232 aa11.1□□□□□ -0.63
CXCR4-203ENST00000466288 STEAP3Q658P3 488 aa11.1□□□□□ -0.63
CXCR4-203ENST00000466288 SFXN4Q6P4A7 337 aa11.1□□□□□ -0.63
CXCR4-203ENST00000466288 FAM131AQ6UXB0 335 aa11.1□□□□□ -0.63
CXCR4-203ENST00000466288 OR4C12Q96R67 309 aa11.1□□□□□ -0.63
CXCR4-203ENST00000466288 NEK6Q9HC98 313 aa11.1□□□□□ -0.63
CXCR4-203ENST00000466288 KIAA1456Q9P272 454 aa11.1□□□□□ -0.63
CXCR4-203ENST00000466288 OR4C45A6NMZ5 311 aa11.09□□□□□ -0.63
CXCR4-203ENST00000466288 IGLV1-51P01701 117 aa11.09□□□□□ -0.63
CXCR4-203ENST00000466288 ZNF20P17024 532 aa11.09□□□□□ -0.63
CXCR4-203ENST00000466288 SRMP19623 302 aa11.09□□□□□ -0.63
CXCR4-203ENST00000466288 PITPNAQ00169 270 aa11.09□□□□□ -0.63
CXCR4-203ENST00000466288 TMEM244Q5VVB8 128 aa11.09□□□□□ -0.63
CXCR4-203ENST00000466288 POC5Q8NA72 575 aa11.09□□□□□ -0.63
CXCR4-203ENST00000466288 OR52M1Q8NGK5 317 aa11.09□□□□□ -0.63
CXCR4-203ENST00000466288 OR13C9Q8NGT0 318 aa11.09□□□□□ -0.63
CXCR4-203ENST00000466288 OR2G2Q8NGZ5 317 aa11.09□□□□□ -0.63
CXCR4-203ENST00000466288 GPR148Q8TDV2 347 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms