RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ZNF251Q9BRH9 671 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 RBM38Q9H0Z9 239 aaKnown RBP16.26■□□□□ 0.19
SKA3-205ENST00000465471 RDH8Q9NYR8 311 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 HPGDSO60760 199 aa16.25■□□□□ 0.19
SKA3-205ENST00000465471 PTHLHP12272 177 aa16.25■□□□□ 0.19
SKA3-205ENST00000465471 ELK1P19419 428 aa16.25■□□□□ 0.19
SKA3-205ENST00000465471 MZT2AQ6P582 158 aa16.25■□□□□ 0.19
SKA3-205ENST00000465471 C12orf54Q6X4T0 127 aa16.25■□□□□ 0.19
SKA3-205ENST00000465471 RBM14Q96PK6 669 aaKnown RBP16.25■□□□□ 0.19
SKA3-205ENST00000465471 ST6GALNAC5Q9BVH7 336 aa16.25■□□□□ 0.19
SKA3-205ENST00000465471 NPFFR1Q9GZQ6 430 aa16.25■□□□□ 0.19
SKA3-205ENST00000465471 GHITMQ9H3K2 345 aa16.25■□□□□ 0.19
SKA3-205ENST00000465471 BEX1Q9HBH7 125 aa16.25■□□□□ 0.19
SKA3-205ENST00000465471 CCDC59Q9P031 241 aaKnown RBP16.25■□□□□ 0.19
SKA3-205ENST00000465471 PIPOXQ9P0Z9 390 aa16.25■□□□□ 0.19
SKA3-205ENST00000465471 CLPSL1A2RUU4 121 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 BET1O15155 118 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 NOL3O60936 208 aaKnown RBP16.24■□□□□ 0.19
SKA3-205ENST00000465471 LPLP06858 475 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 FAM106CPP0CH98 169 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 CD1BP29016 333 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 OR3A3P47888 321 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 MOB3BQ86TA1 216 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 HOGA1Q86XE5 327 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 Q8N2B8 174 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 Q8N6K4 173 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 OR10J5Q8NHC4 309 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 CAPSLQ8WWF8 208 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 ANXA10Q9UJ72 324 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 ANAPC10Q9UM13 185 aa16.24■□□□□ 0.19
SKA3-205ENST00000465471 RAB29O14966 203 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 IGKV1D-33P01593 117 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 IGKV1-33P01594 117 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 HLA-DQB1P01920 261 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 SOX6P35712 828 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 LSAMPQ13449 338 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 CNIH2Q6PI25 160 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 H1FOOQ8IZA3 346 aaPredicted RBP16.23■□□□□ 0.19
SKA3-205ENST00000465471 DTX3Q8N9I9 347 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 OR4C13Q8NGP0 309 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 NABP2Q9BQ15 211 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 SLC25A33Q9BSK2 321 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 ZNF702PQ9H963 129 aa16.23■□□□□ 0.19
SKA3-205ENST00000465471 ZNF736B4DX44 427 aaPredicted RBP16.22■□□□□ 0.19
SKA3-205ENST00000465471 PROP1O75360 226 aa16.22■□□□□ 0.19
SKA3-205ENST00000465471 AMY1AP04745 511 aa16.22■□□□□ 0.19
SKA3-205ENST00000465471 AMY2AP04746 511 aa16.22■□□□□ 0.19
SKA3-205ENST00000465471 CTXN2P0C2S0 81 aa16.22■□□□□ 0.19
SKA3-205ENST00000465471 CBX5P45973 191 aa16.22■□□□□ 0.19
SKA3-205ENST00000465471 PROK1P58294 105 aa16.22■□□□□ 0.19
SKA3-205ENST00000465471 GVQW1Q8N7I0 195 aa16.22■□□□□ 0.19
SKA3-205ENST00000465471 BEST4Q8NFU0 473 aa16.22■□□□□ 0.19
SKA3-205ENST00000465471 ABHD14BQ96IU4 210 aa16.22■□□□□ 0.19
SKA3-205ENST00000465471 AKR1E2Q96JD6 320 aa16.22■□□□□ 0.19
SKA3-205ENST00000465471 MRPL20Q9BYC9 149 aaKnown RBP16.22■□□□□ 0.19
SKA3-205ENST00000465471 IGHV3-72A0A0B4J1Y9 119 aa16.21■□□□□ 0.19
SKA3-205ENST00000465471 RPL39P5Q59GN2 51 aa16.21■□□□□ 0.19
SKA3-205ENST00000465471 SNAPC3Q92966 411 aa16.21■□□□□ 0.19
SKA3-205ENST00000465471 EAF1Q96JC9 268 aaPredicted RBP16.21■□□□□ 0.19
SKA3-205ENST00000465471 S1PR3Q99500 378 aa16.21■□□□□ 0.19
SKA3-205ENST00000465471 ZNF747Q9BV97 191 aa16.21■□□□□ 0.19
SKA3-205ENST00000465471 SLIRPQ9GZT3 109 aaKnown RBP16.21■□□□□ 0.19
SKA3-205ENST00000465471 MIXL1Q9H2W2 232 aa16.21■□□□□ 0.19
SKA3-205ENST00000465471 MOB4Q9Y3A3 225 aa16.21■□□□□ 0.19
SKA3-205ENST00000465471 TMEM11P17152 192 aa16.2■□□□□ 0.18
SKA3-205ENST00000465471 BLCAPP62952 87 aa16.2■□□□□ 0.18
SKA3-205ENST00000465471 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.2■□□□□ 0.18
SKA3-205ENST00000465471 OR2T10Q8NGZ9 312 aa16.2■□□□□ 0.18
SKA3-205ENST00000465471 WFDC12Q8WWY7 111 aa16.2■□□□□ 0.18
SKA3-205ENST00000465471 GINS4Q9BRT9 223 aa16.2■□□□□ 0.18
SKA3-205ENST00000465471 ADAM30Q9UKF2 790 aa16.2■□□□□ 0.18
SKA3-205ENST00000465471 GAB2Q9UQC2 676 aa16.2■□□□□ 0.18
SKA3-205ENST00000465471 RNF114Q9Y508 228 aa16.2■□□□□ 0.18
SKA3-205ENST00000465471 SMIM31A0A1B0GVY4 71 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 M0QZK8 103 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 ZNF701M0R085 212 aaPredicted RBP16.19■□□□□ 0.18
SKA3-205ENST00000465471 TPPPO94811 219 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 CT45A6P0DMU7 189 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 CT45A5P0DMU8 189 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 CT45A7P0DMV0 189 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 NAT1P18440 290 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 PRSS3P35030 304 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 HES1Q14469 280 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 Q6ZS46 218 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 C3orf56Q8N813 242 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 GPX8Q8TED1 209 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 PRSS22Q9GZN4 317 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 RNF150Q9ULK6 438 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 SIGLEC9Q9Y336 463 aa16.19■□□□□ 0.18
SKA3-205ENST00000465471 MEIS3P1A6NDR6 274 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 CTDSP2O14595 271 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 FGF16O43320 207 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 TUSC2O75896 110 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 MOSP00540 346 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 OR8U9P0C7N5 309 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 GPR12P47775 334 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 C11orf88Q6PI97 169 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 LAX1Q8IWV1 398 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 C5orf56Q8N8D9 126 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 OR8U1Q8NH10 309 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms