RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 MALSU1Q96EH3 234 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 THAP7Q9BT49 309 aaPredicted RBP14.14□□□□□ -0.15
CPSF4-209ENST00000465132 ABHD14AQ9BUJ0 271 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 TNFRSF19Q9NS68 423 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 DPM3Q9P2X0 92 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 V9GYH0 126 aa14.14□□□□□ -0.15
CPSF4-209ENST00000465132 MEIS3P1A6NDR6 274 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 ODF3BA8MYP8 253 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 CRYBA1P05813 215 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 OR5H8P0DN80 308 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 PPP1CCP36873 323 aaKnown RBP14.13□□□□□ -0.15
CPSF4-209ENST00000465132 TSPAN5P62079 268 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 RELBQ01201 579 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 HLA-DRB5Q30154 266 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 PLA1AQ53H76 456 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 RNASE10Q5GAN6 216 aaKnown RBP14.13□□□□□ -0.15
CPSF4-209ENST00000465132 TRIQKQ629K1 86 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 SLC25A48Q6ZT89 311 aaKnown RBP14.13□□□□□ -0.15
CPSF4-209ENST00000465132 TMEM86BQ8N661 226 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 TMEM229BQ8NBD8 167 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 OR10V1Q8NGI7 309 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 UBALD1Q8TB05 177 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 CHIAQ9BZP6 476 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 C1RLQ9NZP8 487 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 PIPOXQ9P0Z9 390 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 ZNF221Q9UK13 617 aa14.13□□□□□ -0.15
CPSF4-209ENST00000465132 CMYA5Q8N3K9 4069 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 IGHV3-43A0A0B4J1X8 118 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 BUB1B-PAK6H3BSN5 160 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 NDUFA7O95182 113 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 IGLV1-47P01700 117 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 IGHV3-43DP0DP04 118 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 SAA4P35542 130 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 GNG10P50151 68 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 DGCR2P98153 550 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 KLRD1Q13241 179 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 ZNF846Q147U1 533 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 IGSF11Q5DX21 431 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 Q6ZPA2 131 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 PDZD9Q8IXQ8 264 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 OR6F1Q8NGZ6 308 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 S1PR3Q99500 378 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 RDH8Q9NYR8 311 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 EHFQ9NZC4 300 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 KLK11Q9UBX7 282 aa14.12□□□□□ -0.15
CPSF4-209ENST00000465132 RBMX2Q9Y388 322 aaKnown RBP14.12□□□□□ -0.15
CPSF4-209ENST00000465132 RAB29O14966 203 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 HLA-DMAP28067 261 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 CD40LGP29965 261 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 BRS3P32247 399 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 GDNFP39905 211 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 LUMP51884 338 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-209ENST00000465132 DYRK1AQ13627 763 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 RNASE12Q5GAN4 147 aaKnown RBP14.11□□□□□ -0.15
CPSF4-209ENST00000465132 VAX1Q5SQQ9 334 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 HCP5Q6MZN7 132 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 FAM71F2Q6NXP2 309 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 LPCAT3Q6P1A2 487 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 OVCH2Q7RTZ1 564 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 H1FOOQ8IZA3 346 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-209ENST00000465132 TOMM5Q8N4H5 51 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 ARRDC1Q8N5I2 433 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-209ENST00000465132 GIMAP1Q8WWP7 306 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 SNAPC3Q92966 411 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 RPEQ96AT9 228 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 CITED1Q99966 193 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 CCDC32Q9BV29 185 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 OR2W1Q9Y3N9 320 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 POMT1Q9Y6A1 747 aa14.11□□□□□ -0.15
CPSF4-209ENST00000465132 CLPSL1A2RUU4 121 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 FAM172BPA6NC97 362 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 BTBD17A6NE02 478 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 CENPXA8MT69 81 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 DISC1C4P0D8 188 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 GAPDHP04406 335 aaKnown RBP14.1□□□□□ -0.15
CPSF4-209ENST00000465132 AKAIN1P0CW23 69 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 HRH1P35367 487 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 HERV-K104P61576 105 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 HERPUD1Q15011 391 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 AANATQ16613 207 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 OR4P4Q8NGL7 312 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 SSMEM1Q8WWF3 244 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 TOMM40LQ969M1 308 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 SRRQ9GZT4 340 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 OR1A1Q9P1Q5 309 aa14.1□□□□□ -0.15
CPSF4-209ENST00000465132 IGKV1D-8A0A087WSZ0 117 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 IGKV1-6A0A0C4DH72 117 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 RAB3DO95716 219 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 PMP2P02689 132 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 S100GP29377 79 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 FCGR2CP31995 323 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 ECI1P42126 302 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 GPR12P47775 334 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 PPP5CP53041 499 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 RPL15P61313 204 aaKnown RBP14.09□□□□□ -0.15
CPSF4-209ENST00000465132 GNMTQ14749 295 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 CT45A1Q5HYN5 189 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 STEAP1BQ6NZ63 245 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 DHRS11Q6UWP2 260 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms