RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 LRRC36Q1X8D7 754 aa17.42■□□□□ 0.38
USP4-208ENST00000464168 TCTEX1D1Q8N7M0 179 aa17.42■□□□□ 0.38
USP4-208ENST00000464168 CITED4Q96RK1 184 aa17.42■□□□□ 0.38
USP4-208ENST00000464168 SULT4A1Q9BR01 284 aa17.42■□□□□ 0.38
USP4-208ENST00000464168 UQCC2Q9BRT2 126 aa17.42■□□□□ 0.38
USP4-208ENST00000464168 OR8U9P0C7N5 309 aa17.41■□□□□ 0.38
USP4-208ENST00000464168 CT45A6P0DMU7 189 aa17.41■□□□□ 0.38
USP4-208ENST00000464168 CT45A5P0DMU8 189 aa17.41■□□□□ 0.38
USP4-208ENST00000464168 CT45A7P0DMV0 189 aa17.41■□□□□ 0.38
USP4-208ENST00000464168 MED21Q13503 144 aa17.41■□□□□ 0.38
USP4-208ENST00000464168 FAM71F2Q6NXP2 309 aa17.41■□□□□ 0.38
USP4-208ENST00000464168 CD200R1LQ6Q8B3 271 aa17.41■□□□□ 0.38
USP4-208ENST00000464168 FAAP24Q9BTP7 215 aa17.41■□□□□ 0.38
USP4-208ENST00000464168 GAB2Q9UQC2 676 aa17.41■□□□□ 0.38
USP4-208ENST00000464168 LYSTQ99698 3801 aa17.4■□□□□ 0.38
USP4-208ENST00000464168 ST8SIA5O15466 376 aa17.4■□□□□ 0.38
USP4-208ENST00000464168 IGHV3-11P01762 117 aa17.4■□□□□ 0.38
USP4-208ENST00000464168 HSPB1P04792 205 aaKnown RBP17.4■□□□□ 0.38
USP4-208ENST00000464168 RPL39P5Q59GN2 51 aa17.4■□□□□ 0.38
USP4-208ENST00000464168 NKAIN3Q8N8D7 197 aa17.4■□□□□ 0.38
USP4-208ENST00000464168 IL1F10Q8WWZ1 152 aa17.4■□□□□ 0.38
USP4-208ENST00000464168 GGHQ92820 318 aa17.4■□□□□ 0.38
USP4-208ENST00000464168 TM2D3Q9BRN9 247 aa17.4■□□□□ 0.38
USP4-208ENST00000464168 PIPOXQ9P0Z9 390 aa17.4■□□□□ 0.38
USP4-208ENST00000464168 GHRLQ9UBU3 117 aa17.4■□□□□ 0.38
USP4-208ENST00000464168 STEAP1Q9UHE8 339 aa17.4■□□□□ 0.38
USP4-208ENST00000464168 LCE6AA0A183 80 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 RAB29O14966 203 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 TAS2R43P59537 309 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 TMEM267Q0VDI3 215 aaPredicted RBP17.39■□□□□ 0.37
USP4-208ENST00000464168 ST3GAL4Q11206 333 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 SRSF7Q16629 238 aaKnown RBP eCLIP17.39■□□□□ 0.37
USP4-208ENST00000464168 GLDNQ6ZMI3 551 aaPredicted RBP17.39■□□□□ 0.37
USP4-208ENST00000464168 PPP1R27Q86WC6 154 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 Q8N1Y9 231 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 FLYWCH2Q96CP2 140 aaKnown RBP17.39■□□□□ 0.37
USP4-208ENST00000464168 NEDD4LQ96PU5 975 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 OR4C12Q96R67 309 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 PARP12Q9H0J9 701 aaKnown RBP17.39■□□□□ 0.37
USP4-208ENST00000464168 PALMDQ9NP74 551 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 ABRACLQ9P1F3 81 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 SLC23A1Q9UHI7 598 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 STARD9Q9P2P6 4700 aa17.39■□□□□ 0.37
USP4-208ENST00000464168 H0YJW9 148 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 SNRPBP14678 240 aaKnown RBP17.38■□□□□ 0.37
USP4-208ENST00000464168 CELP19835 753 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 PITPNAQ00169 270 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 PLGLAQ15195 96 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 AKIRIN2Q53H80 203 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 ACTBL2Q562R1 376 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 OR10K2Q6IF99 312 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 PYHIN1Q6K0P9 492 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 C6orf201Q7Z4U5 140 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 ABHD5Q8WTS1 349 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 RHOVQ96L33 236 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 MS4A10Q96PG2 267 aa17.38■□□□□ 0.37
USP4-208ENST00000464168 FAM103A1Q9BTL3 118 aaKnown RBP17.38■□□□□ 0.37
USP4-208ENST00000464168 OR5H14A6NHG9 310 aa17.37■□□□□ 0.37
USP4-208ENST00000464168 CD1AP06126 327 aa17.37■□□□□ 0.37
USP4-208ENST00000464168 GSTP1P09211 210 aaKnown RBP17.37■□□□□ 0.37
USP4-208ENST00000464168 IGHV4-30-4P0DP06 118 aa17.37■□□□□ 0.37
USP4-208ENST00000464168 MC5RP33032 325 aa17.37■□□□□ 0.37
USP4-208ENST00000464168 ZNF880Q6PDB4 577 aa17.37■□□□□ 0.37
USP4-208ENST00000464168 UNQ5815/PRO19632Q6UWF5 114 aa17.37■□□□□ 0.37
USP4-208ENST00000464168 HAPLN4Q86UW8 402 aa17.37■□□□□ 0.37
USP4-208ENST00000464168 SVOPQ8N4V2 548 aa17.37■□□□□ 0.37
USP4-208ENST00000464168 OR5AN1Q8NGI8 311 aa17.37■□□□□ 0.37
USP4-208ENST00000464168 AGMATQ9BSE5 352 aa17.37■□□□□ 0.37
USP4-208ENST00000464168 CNOT2Q9NZN8 540 aaKnown RBP17.37■□□□□ 0.37
USP4-208ENST00000464168 RNF150Q9ULK6 438 aa17.37■□□□□ 0.37
USP4-208ENST00000464168 LDLRAD4O15165 306 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 RBBP9O75884 186 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 NAPSAO96009 420 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 UBBP0CG47 229 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 HTR2CP28335 458 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 TPPP2P59282 170 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 RPS27AP62979 156 aaKnown RBP17.36■□□□□ 0.37
USP4-208ENST00000464168 ZFAND6Q6FIF0 208 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 ZNF562Q6V9R5 426 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 LFNGQ8NES3 379 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 CYGBQ8WWM9 190 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 ABHD14BQ96IU4 210 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 CLCC1Q96S66 551 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 RNF5Q99942 180 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 WASHC3Q9Y3C0 194 aa17.36■□□□□ 0.37
USP4-208ENST00000464168 EFCAB10A6NFE3 127 aa17.35■□□□□ 0.37
USP4-208ENST00000464168 H7C2Y5 167 aa17.35■□□□□ 0.37
USP4-208ENST00000464168 ARPC1BO15143 372 aaKnown RBP17.35■□□□□ 0.37
USP4-208ENST00000464168 INSL4Q14641 139 aa17.35■□□□□ 0.37
USP4-208ENST00000464168 PSG5Q15238 335 aa17.35■□□□□ 0.37
USP4-208ENST00000464168 TTC23Q5W5X9 447 aa17.35■□□□□ 0.37
USP4-208ENST00000464168 EDA2RQ9HAV5 297 aa17.35■□□□□ 0.37
USP4-208ENST00000464168 C19orf73Q9NVV2 129 aa17.35■□□□□ 0.37
USP4-208ENST00000464168 A8MZ25 164 aa17.34■□□□□ 0.37
USP4-208ENST00000464168 ITGB1BP1O14713 200 aa17.34■□□□□ 0.37
USP4-208ENST00000464168 HSPA12AO43301 675 aa17.34■□□□□ 0.37
USP4-208ENST00000464168 IGLV1-51P01701 117 aa17.34■□□□□ 0.37
USP4-208ENST00000464168 MAPK3P27361 379 aaPredicted RBP17.34■□□□□ 0.37
USP4-208ENST00000464168 SETD9Q8NE22 299 aa17.34■□□□□ 0.37
USP4-208ENST00000464168 THRSPQ92748 146 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms