RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 SERPINE3A8MV23 424 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 ORC5O43913 435 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 SCGNO76038 276 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 TMEM11P17152 192 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 SSTR5P35346 364 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 DCTN2Q13561 401 aaKnown RBP18.3■□□□□ 0.52
SSNA1-203ENST00000463511 DIAPH2-AS1Q14236 149 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 HNF4GQ14541 408 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 CDNFQ49AH0 187 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 UBE2NLQ5JXB2 153 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 ZNF880Q6PDB4 577 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 RFESDQ8TAC1 157 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 P2RX4Q99571 388 aa18.3■□□□□ 0.52
SSNA1-203ENST00000463511 J3QR06 171 aa18.29■□□□□ 0.52
SSNA1-203ENST00000463511 C5orf24Q7Z6I8 188 aa18.29■□□□□ 0.52
SSNA1-203ENST00000463511 ARL11Q969Q4 196 aa18.29■□□□□ 0.52
SSNA1-203ENST00000463511 DUX3Q96PT4 197 aa18.29■□□□□ 0.52
SSNA1-203ENST00000463511 CMSS1Q9BQ75 279 aaKnown RBP18.29■□□□□ 0.52
SSNA1-203ENST00000463511 RIMS4Q9H426 269 aaPredicted RBP18.29■□□□□ 0.52
SSNA1-203ENST00000463511 IDI2-AS1Q9NZ38 188 aa18.29■□□□□ 0.52
SSNA1-203ENST00000463511 RSL24D1Q9UHA3 163 aaKnown RBP18.29■□□□□ 0.52
SSNA1-203ENST00000463511 ELF5Q9UKW6 265 aaPredicted RBP18.29■□□□□ 0.52
SSNA1-203ENST00000463511 A0A0A6YYH2 397 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 A6NJ64 397 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 C12orf77C9JDV5 145 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 SLC6A1P30531 599 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 SOX6P35712 828 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 MYCNOSP40205 109 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 MADCAM1Q13477 382 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 LTC4SQ16873 150 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 ZNF260Q3ZCT1 412 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 C6orf183Q5T699 404 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 UBALD1Q8TB05 177 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 AP3S1Q92572 193 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 CMTM3Q96MX0 182 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 CHMP1AQ9HD42 196 aaPredicted RBP18.28■□□□□ 0.52
SSNA1-203ENST00000463511 ZFP57Q9NU63 452 aa18.28■□□□□ 0.52
SSNA1-203ENST00000463511 TRAV18A0A075B6X5 111 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 DPPA5A6NC42 116 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 ZNF701M0R085 212 aaPredicted RBP18.27■□□□□ 0.52
SSNA1-203ENST00000463511 HPGDSO60760 199 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 EIF4EP06730 217 aaKnown RBP18.27■□□□□ 0.52
SSNA1-203ENST00000463511 CD3GP09693 182 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 GNG10P50151 68 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 DGCR2P98153 550 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 ARL6IP1Q15041 203 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 MZT2AQ6P582 158 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 TRAT1Q6PIZ9 186 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 SLC35E3Q7Z769 313 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 OR10A7Q8NGE5 316 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 S100A16Q96FQ6 103 aaKnown RBP18.27■□□□□ 0.52
SSNA1-203ENST00000463511 TAF9BQ9HBM6 251 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 DIABLOQ9NR28 239 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 CCDC59Q9P031 241 aaKnown RBP18.27■□□□□ 0.52
SSNA1-203ENST00000463511 PSG11Q9UQ72 335 aa18.27■□□□□ 0.52
SSNA1-203ENST00000463511 SMIM31A0A1B0GVY4 71 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 FGF16O43320 207 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 IGKV1D-33P01593 117 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 IGKV1-33P01594 117 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 HBZP02008 142 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 GSTP1P09211 210 aaKnown RBP18.26■□□□□ 0.51
SSNA1-203ENST00000463511 RAB25P57735 213 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 SLC35B1P78383 322 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 ZNF554Q86TJ5 538 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 ZNF695Q8IW36 515 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 OR1L1Q8NH94 360 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 SETD6Q8TBK2 473 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 Q9N2K0 584 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 C12orf4Q9NQ89 552 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 KCNIP1Q9NZI2 227 aa18.26■□□□□ 0.51
SSNA1-203ENST00000463511 XRCC3O43542 346 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 IGHG2P01859 326 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 APOA1P02647 267 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 ELK1P19419 428 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 RAB7AP51149 207 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 ARFRP1Q13795 201 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 HMGN3Q15651 99 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 HACD4Q5VWC8 232 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 FOXRED2Q8IWF2 684 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 OR8H3Q8N146 312 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 STPG2Q8N412 459 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 COMMD1Q8N668 190 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 RAX2Q96IS3 184 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 NDUFA13Q9P0J0 144 aa18.25■□□□□ 0.51
SSNA1-203ENST00000463511 TMEM235A6NFC5 223 aa18.24■□□□□ 0.51
SSNA1-203ENST00000463511 SPINT2O43291 252 aa18.24■□□□□ 0.51
SSNA1-203ENST00000463511 PNLIPRP3Q17RR3 467 aa18.24■□□□□ 0.51
SSNA1-203ENST00000463511 FAM53AQ6NSI3 398 aaPredicted RBP18.24■□□□□ 0.51
SSNA1-203ENST00000463511 MOB1BQ7L9L4 216 aa18.24■□□□□ 0.51
SSNA1-203ENST00000463511 IZUMO1Q8IYV9 350 aa18.24■□□□□ 0.51
SSNA1-203ENST00000463511 OR52M1Q8NGK5 317 aa18.24■□□□□ 0.51
SSNA1-203ENST00000463511 SLIRPQ9GZT3 109 aaKnown RBP18.24■□□□□ 0.51
SSNA1-203ENST00000463511 AUNIPQ9H7T9 357 aa18.24■□□□□ 0.51
SSNA1-203ENST00000463511 ZMAT5Q9UDW3 170 aaKnown RBP18.24■□□□□ 0.51
SSNA1-203ENST00000463511 A0A1W2PPE3 182 aa18.23■□□□□ 0.51
SSNA1-203ENST00000463511 LINC01548A6NM66 108 aa18.23■□□□□ 0.51
SSNA1-203ENST00000463511 CCL24O00175 119 aa18.23■□□□□ 0.51
SSNA1-203ENST00000463511 SDCBPO00560 298 aaPredicted RBP18.23■□□□□ 0.51
SSNA1-203ENST00000463511 CTDSP2O14595 271 aa18.23■□□□□ 0.51
SSNA1-203ENST00000463511 SSX5O60225 188 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms