RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 EAF1Q96JC9 268 aaPredicted RBP14.09□□□□□ -0.15
VPS52-214ENST00000463486 PLSCR3Q9NRY6 295 aa14.09□□□□□ -0.15
VPS52-214ENST00000463486 TRAV18A0A075B6X5 111 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 TXNL1O43396 289 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 IGKV1D-33P01593 117 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 IGKV1-33P01594 117 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 CD1BP29016 333 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 ARFRP1Q13795 201 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 KIR2DS1Q14954 304 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 C11orf88Q6PI97 169 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 KCTD12Q96CX2 325 aaKnown RBP14.08□□□□□ -0.16
VPS52-214ENST00000463486 PRSS22Q9GZN4 317 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 WNT10AQ9GZT5 417 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 DCSTAMPQ9H295 470 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 AUNIPQ9H7T9 357 aa14.08□□□□□ -0.16
VPS52-214ENST00000463486 MRPS15P82914 257 aaKnown RBP14.07□□□□□ -0.16
VPS52-214ENST00000463486 HNF4GQ14541 408 aa14.07□□□□□ -0.16
VPS52-214ENST00000463486 GPR141Q7Z602 305 aa14.07□□□□□ -0.16
VPS52-214ENST00000463486 OR2T6Q8NHC8 308 aa14.07□□□□□ -0.16
VPS52-214ENST00000463486 ABHD14BQ96IU4 210 aa14.07□□□□□ -0.16
VPS52-214ENST00000463486 NABP2Q9BQ15 211 aa14.07□□□□□ -0.16
VPS52-214ENST00000463486 MRPL20Q9BYC9 149 aaKnown RBP14.07□□□□□ -0.16
VPS52-214ENST00000463486 RDH8Q9NYR8 311 aa14.07□□□□□ -0.16
VPS52-214ENST00000463486 SH2D7A6NKC9 451 aaPredicted RBP14.06□□□□□ -0.16
VPS52-214ENST00000463486 HAX1O00165 279 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 XRCC3O43542 346 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 CT45A6P0DMU7 189 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 CT45A5P0DMU8 189 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 CT45A7P0DMV0 189 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 PTHLHP12272 177 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 TMEM11P17152 192 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 TALDO1P37837 337 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 PITPNAQ00169 270 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 LSAMPQ13449 338 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 RPL39P5Q59GN2 51 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 UBE2NLQ5JXB2 153 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 C5orf56Q8N8D9 126 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 SAMD12Q8N8I0 201 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 RITA1Q96K30 269 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 WNK1Q9H4A3 2382 aa14.06□□□□□ -0.16
VPS52-214ENST00000463486 RAB29O14966 203 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 BET1O15155 118 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 HSPA12AO43301 675 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 RPL5P46777 297 aaKnown RBP14.05□□□□□ -0.16
VPS52-214ENST00000463486 TMEM95Q3KNT9 176 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 ABCA11PQ4W5N1 156 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 FAM71F2Q6NXP2 309 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 DTX3Q8N9I9 347 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 OR2T10Q8NGZ9 312 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 EDARADDQ8WWZ3 215 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 AKR1E2Q96JD6 320 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 ST6GALNAC5Q9BVH7 336 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 GHITMQ9H3K2 345 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 DIABLOQ9NR28 239 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 PIPOXQ9P0Z9 390 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 RNF150Q9ULK6 438 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 MOB4Q9Y3A3 225 aa14.05□□□□□ -0.16
VPS52-214ENST00000463486 M0QZK8 103 aa14.04□□□□□ -0.16
VPS52-214ENST00000463486 FGF16O43320 207 aa14.04□□□□□ -0.16
VPS52-214ENST00000463486 MOSP00540 346 aa14.04□□□□□ -0.16
VPS52-214ENST00000463486 EIF4EP06730 217 aaKnown RBP14.04□□□□□ -0.16
VPS52-214ENST00000463486 RORCP51449 518 aa14.04□□□□□ -0.16
VPS52-214ENST00000463486 GNG2P59768 71 aa14.04□□□□□ -0.16
VPS52-214ENST00000463486 HES1Q14469 280 aa14.04□□□□□ -0.16
VPS52-214ENST00000463486 SPCS2Q15005 226 aa14.04□□□□□ -0.16
VPS52-214ENST00000463486 H1FOOQ8IZA3 346 aaPredicted RBP14.04□□□□□ -0.16
VPS52-214ENST00000463486 KLHDC1Q8N7A1 406 aa14.04□□□□□ -0.16
VPS52-214ENST00000463486 S100A16Q96FQ6 103 aaKnown RBP14.04□□□□□ -0.16
VPS52-214ENST00000463486 C5orf30Q96GV9 206 aa14.04□□□□□ -0.16
VPS52-214ENST00000463486 F2RL1P55085 397 aa14.03□□□□□ -0.16
VPS52-214ENST00000463486 LINC00205P59089 165 aa14.03□□□□□ -0.16
VPS52-214ENST00000463486 HOGA1Q86XE5 327 aa14.03□□□□□ -0.16
VPS52-214ENST00000463486 CLVS1Q8IUQ0 354 aaPredicted RBP14.03□□□□□ -0.16
VPS52-214ENST00000463486 GVQW1Q8N7I0 195 aa14.03□□□□□ -0.16
VPS52-214ENST00000463486 Q8N9W7 124 aa14.03□□□□□ -0.16
VPS52-214ENST00000463486 OR10J5Q8NHC4 309 aa14.03□□□□□ -0.16
VPS52-214ENST00000463486 PHF21AQ96BD5 680 aa14.03□□□□□ -0.16
VPS52-214ENST00000463486 CMTM3Q96MX0 182 aa14.03□□□□□ -0.16
VPS52-214ENST00000463486 COMMD3Q9UBI1 195 aa14.03□□□□□ -0.16
VPS52-214ENST00000463486 GAB2Q9UQC2 676 aa14.03□□□□□ -0.16
VPS52-214ENST00000463486 HLA-DQB1P01920 261 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 APOA1P02647 267 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 LPLP06858 475 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 OR8U9P0C7N5 309 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 TMBIM6P55061 237 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 HIST2H2BDQ6DRA6 164 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 CNIH2Q6PI25 160 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 FAM71E2Q8N5Q1 922 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 OR5AN1Q8NGI8 311 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 OR8U1Q8NH10 309 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 ACOT12Q8WYK0 555 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 S1PR3Q99500 378 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 ANXA10Q9UJ72 324 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 ANAPC10Q9UM13 185 aa14.02□□□□□ -0.17
VPS52-214ENST00000463486 LINC01548A6NM66 108 aa14.01□□□□□ -0.17
VPS52-214ENST00000463486 H0YJW9 148 aa14.01□□□□□ -0.17
VPS52-214ENST00000463486 ZNF182P17025 639 aaPredicted RBP14.01□□□□□ -0.17
VPS52-214ENST00000463486 ELK1P19419 428 aa14.01□□□□□ -0.17
VPS52-214ENST00000463486 TAS2R20P59543 309 aa14.01□□□□□ -0.17
VPS52-214ENST00000463486 PRR31Q5SQ13 230 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 393.9 ms