RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 TLE1Q04724 770 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 NCMAPQ5T1S8 102 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 TCF23Q7RTU1 214 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 OR2C3Q8N628 320 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 ST6GALNAC3Q8NDV1 305 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 SDSLQ96GA7 329 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 SEBOXQ9HB31 216 aaPredicted RBP10.63□□□□□ -0.71
VAPB-203ENST00000463370 ZFP57Q9NU63 452 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 PKDREJQ9NTG1 2253 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 C17orf98A8MV24 154 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 AKR1C2P52895 323 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 HTD2P86397 168 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 ADORA2A-AS1P86434 159 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 ZNF816Q0VGE8 651 aaPredicted RBP10.63□□□□□ -0.71
VAPB-203ENST00000463370 CR1LQ2VPA4 569 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 GPR157Q5UAW9 335 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 LEAP2Q969E1 77 aa10.63□□□□□ -0.71
VAPB-203ENST00000463370 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.62□□□□□ -0.71
VAPB-203ENST00000463370 SIGLEC5O15389 551 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 SIAH2O43255 324 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 GAPDHP04406 335 aaKnown RBP10.62□□□□□ -0.71
VAPB-203ENST00000463370 CGB3P0DN86 165 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 CGB7P0DN87 165 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 GZMHP20718 246 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 LPAR6P43657 344 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 CASP6P55212 293 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 C17orf58Q2M2W7 97 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 Q3ZCU0 254 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 STPG2Q8N412 459 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 ZNF561Q8N587 486 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 RNASE11Q8TAA1 199 aaKnown RBP10.62□□□□□ -0.71
VAPB-203ENST00000463370 PPP1R35Q8TAP8 253 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 MARVELD3Q96A59 401 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 GNG12Q9UBI6 72 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 DCHS2Q6V1P9 2916 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 A0A1B0GU03 582 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 H3BP45 60 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 SLC31A2O15432 143 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 FCN3O75636 299 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 JTBO76095 146 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 CST7O76096 145 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 CD55P08174 381 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 CLINT1Q14677 625 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 MST1LQ2TV78 715 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 MORN2Q502X0 79 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 ZNF788Q6ZQV5 615 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 C1orf229Q6ZS94 237 aaPredicted RBP10.62□□□□□ -0.71
VAPB-203ENST00000463370 HSD17B13Q7Z5P4 300 aaPredicted RBP10.62□□□□□ -0.71
VAPB-203ENST00000463370 TMEM252Q8N6L7 170 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 UBAC2Q8NBM4 344 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 RNF141Q8WVD5 230 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 C14orf79Q96F83 325 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 SH3BGRL3Q9H299 93 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 LYRM2Q9NU23 88 aaPredicted RBP10.62□□□□□ -0.71
VAPB-203ENST00000463370 CALYQ9NYX4 217 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 RFNGQ9Y644 331 aa10.62□□□□□ -0.71
VAPB-203ENST00000463370 DSCAMO60469 2012 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 ZNF705EA8MWA4 302 aaPredicted RBP10.61□□□□□ -0.71
VAPB-203ENST00000463370 S1PR2O95136 353 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 ADH4P08319 380 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 G6PCP35575 357 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 TEX36Q5VZQ5 186 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 TRAT1Q6PIZ9 186 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 TCTEX1D2Q8WW35 142 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 LSM10Q969L4 123 aaKnown RBP10.61□□□□□ -0.71
VAPB-203ENST00000463370 RBMXL1Q96E39 390 aaKnown RBP10.61□□□□□ -0.71
VAPB-203ENST00000463370 SAP30LQ9HAJ7 183 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 TAS2R3Q9NYW6 316 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 LPAR3Q9UBY5 353 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 A0A1W2PPE3 182 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 F2RL2O00254 374 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 KRASP01116 189 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 IRF2P14316 349 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 ID4P47928 161 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 ERVFRD-1P60508 538 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 TUSC1Q2TAM9 212 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 UNQ6494/PRO21346Q6UXR6 183 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 SPAG16Q8N0X2 631 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 TMEM217Q8N7C4 229 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 ZBTB34Q8NCN2 500 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 ZCCHC14Q8WYQ9 949 aaKnown RBP10.61□□□□□ -0.71
VAPB-203ENST00000463370 RNASE6Q93091 150 aaKnown RBP10.61□□□□□ -0.71
VAPB-203ENST00000463370 ARV1Q9H2C2 271 aa10.61□□□□□ -0.71
VAPB-203ENST00000463370 WRBO00258 174 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 TMPRSS2O15393 492 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 CLDN14O95500 239 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 CLDN1O95832 211 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 SLC25A6P12236 298 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 TNFRSF1AP19438 455 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 CHRNB4P30926 498 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 VAMP2P63027 116 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 RPL39P5Q59GN2 51 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 CCDC28AQ8IWP9 274 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 EIF4E3Q8N5X7 224 aaKnown RBP10.6□□□□□ -0.71
VAPB-203ENST00000463370 CCL17Q92583 94 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 ZNF665Q9H7R5 613 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 NGBQ9NPG2 151 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 RNF212BA8MTL3 300 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 MMP23AO75900 390 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 IAPPP10997 89 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms