RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PPOXP50336 477 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 PDLIM4P50479 330 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 RAG2P55895 527 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 TSPAN5P62079 268 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 CDK10Q15131 360 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 ZMYND11Q15326 602 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 GRK1Q15835 563 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 SHEQ5VZ18 495 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 ZNF497Q6ZNH5 498 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 IDO2Q6ZQW0 420 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 C17orf107Q6ZR85 190 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 Q6ZS49 121 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 TMEM17Q86X19 198 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 TGIF2LYQ8IUE0 185 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 C1orf87Q8N0U7 546 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 ARRDC1Q8N5I2 433 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 DEFB108BQ8NET1 73 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 PLPPR1Q8TBJ4 325 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 MRPL30Q8TCC3 161 aaKnown RBP6.04□□□□□ -1.44
UBE4B-204ENST00000462658 TMED6Q8WW62 240 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 CCL17Q92583 94 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 PRRT1Q99946 306 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 SLC25A21Q9BQT8 299 aaPredicted RBP6.04□□□□□ -1.44
UBE4B-204ENST00000462658 GINS4Q9BRT9 223 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 C20orf85Q9H1P6 137 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 Q9N2K0 584 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 TMEM106BQ9NUM4 274 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 NECAP2Q9NVZ3 263 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 DCAF16Q9NXF7 216 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 SLC2A8Q9NY64 477 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 EHFQ9NZC4 300 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 FLVCR2Q9UPI3 526 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 PKDREJQ9NTG1 2253 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 LRBAP50851 2863 aa6.04□□□□□ -1.44
UBE4B-204ENST00000462658 ROS1P08922 2347 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 ABCA12Q86UK0 2595 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 PPIAL4EA0A075B759 164 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 IGHV1-69-2A0A0G2JMI3 117 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 KIR2DS1A0A191URI9 304 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 A0A1W2PPR1 153 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 OOEPA6NGQ2 149 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 TRDCB7Z8K6 153 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 PPIAL4DF5H284 164 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 TMEM178BH3BS89 294 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 LGALS8O00214 317 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 ARPC1BO15143 372 aaKnown RBP6.03□□□□□ -1.44
UBE4B-204ENST00000462658 PFDN1O60925 122 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 NDUFB4O95168 129 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 GOSR1O95249 250 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 SOD3P08294 240 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 DANCRP0C864 163 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 GSTT2P0CG29 244 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 PPIAL4FP0DN26 164 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 OR5H8P0DN80 308 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 MUC1P15941 1255 aaPredicted RBP6.03□□□□□ -1.44
UBE4B-204ENST00000462658 KIR2DS4P43632 304 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 OR3A1P47881 315 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 KIR2DS1Q14954 304 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 ATXN7L3Q14CW9 347 aaPredicted RBP6.03□□□□□ -1.44
UBE4B-204ENST00000462658 CARTPTQ16568 116 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 TATDN3Q17R31 274 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 C2orf68Q2NKX9 166 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 TEX36Q5VZQ5 186 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 STUMQ69YW2 141 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 SLC35E4Q6ICL7 350 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 C11orf71Q6IPW1 123 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 ZNF880Q6PDB4 577 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 GAPTQ8N292 157 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 ZNF561Q8N587 486 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 ASCC1Q8N9N2 400 aaKnown RBP6.03□□□□□ -1.44
UBE4B-204ENST00000462658 OR13C8Q8NGS7 320 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 OR6F1Q8NGZ6 308 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 TERB2Q8NHR7 220 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 ANGPTL6Q8NI99 470 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 CCDC107Q8WV48 283 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 PERPQ96FX8 193 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 TRAF4Q9BUZ4 470 aaPredicted RBP6.03□□□□□ -1.44
UBE4B-204ENST00000462658 SHARPINQ9H0F6 387 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 RAB1BQ9H0U4 201 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 UBTD1Q9HAC8 227 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 ZNF222Q9UK12 451 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 TRAPPC2LQ9UL33 140 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 MGAT4AQ9UM21 535 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 PAM16Q9Y3D7 125 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 PPIAL4AQ9Y536 164 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 ALG5Q9Y673 324 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 PDZD2O15018 2839 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 APCP25054 2843 aa6.03□□□□□ -1.44
UBE4B-204ENST00000462658 NOTCH2Q04721 2471 aa6.02□□□□□ -1.45
UBE4B-204ENST00000462658 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.45
UBE4B-204ENST00000462658 TRAV39A0A0B4J263 110 aa6.02□□□□□ -1.45
UBE4B-204ENST00000462658 TRAV38-1A0A0B4J264 116 aa6.02□□□□□ -1.45
UBE4B-204ENST00000462658 A0A0B4J293 547 aa6.02□□□□□ -1.45
UBE4B-204ENST00000462658 TMEM30CPA0ZSE6 113 aa6.02□□□□□ -1.45
UBE4B-204ENST00000462658 USP17L23D6RBM5 183 aa6.02□□□□□ -1.45
UBE4B-204ENST00000462658 K7N7A8 449 aa6.02□□□□□ -1.45
UBE4B-204ENST00000462658 FABP7O15540 132 aa6.02□□□□□ -1.45
UBE4B-204ENST00000462658 KCNAB3O43448 404 aa6.02□□□□□ -1.45
UBE4B-204ENST00000462658 PRAF2O60831 178 aa6.02□□□□□ -1.45
UBE4B-204ENST00000462658 ZNF737O75373 536 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms