RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 HBZP02008 142 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 APOA1P02647 267 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 FCGR3AP08637 254 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 FBP1P09467 338 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 SRP14P37108 136 aaKnown RBP4.6□□□□□ -1.67
VPS36-202ENST00000462289 VEGFCP49767 419 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 ZNF134P52741 427 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 LGALS4P56470 323 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 SCN1BQ07699 218 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 ZNF816Q0VGE8 651 aaPredicted RBP4.6□□□□□ -1.67
VPS36-202ENST00000462289 SPCS2Q15005 226 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 MORN2Q502X0 79 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 ATAD3CQ5T2N8 411 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 PRAMEF5Q5TYX0 476 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 HACD4Q5VWC8 232 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 FAM71F2Q6NXP2 309 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 ZNF782Q6ZMW2 699 aaPredicted RBP4.6□□□□□ -1.67
VPS36-202ENST00000462289 Q6ZTK2 550 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 GPR141Q7Z602 305 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 LHFPL4Q7Z7J7 247 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 Q8N2B8 174 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 ABHD12Q8N2K0 398 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 PNKDQ8N490 385 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 Q8N6K4 173 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 SIGLECL1Q8N7X8 197 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 OR9G1Q8NH87 305 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 NDNFQ8TB73 568 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 MRGPRDQ8TDS7 321 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 ZNF418Q8TF45 676 aaPredicted RBP4.6□□□□□ -1.67
VPS36-202ENST00000462289 WIPF2Q8TF74 440 aaPredicted RBP4.6□□□□□ -1.67
VPS36-202ENST00000462289 CREB3L1Q96BA8 519 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 ISOC1Q96CN7 298 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 ZNF251Q9BRH9 671 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 HDHD3Q9BSH5 251 aaPredicted RBP4.6□□□□□ -1.67
VPS36-202ENST00000462289 SLIRPQ9GZT3 109 aaKnown RBP4.6□□□□□ -1.67
VPS36-202ENST00000462289 MMP28Q9H239 520 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 AUNIPQ9H7T9 357 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 TAF9BQ9HBM6 251 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 RAB9BQ9NP90 201 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 PLEKHJ1Q9NW61 149 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 CCDC59Q9P031 241 aaKnown RBP4.6□□□□□ -1.67
VPS36-202ENST00000462289 GAB2Q9UQC2 676 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 MMP24Q9Y5R2 645 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 A3GALT2U3KPV4 340 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 MGAM2Q2M2H8 2515 aa4.6□□□□□ -1.67
VPS36-202ENST00000462289 NBEAL1Q6ZS30 2694 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 IGKV1D-8A0A087WSZ0 117 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 TRBV6-7A0A0A0MS04 114 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 TRAV39A0A0B4J263 110 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 MDFIC2A0A1B0GVS7 189 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 TMEM89A2RUT3 159 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 SMIM30A4D0T7 59 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 A6NDX4 124 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 LANCL1O43813 399 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 TUSC2O75896 110 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 TSPAN9O75954 239 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 LPLP06858 475 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 ELANEP08246 267 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 ZNF182P17025 639 aaPredicted RBP4.59□□□□□ -1.67
VPS36-202ENST00000462289 OMGP23515 440 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 HTR1DP28221 377 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 GLP1RP43220 463 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 HLA-DRB3P79483 266 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 PITPNAQ00169 270 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 PRB3Q04118 309 aaPredicted RBP4.59□□□□□ -1.67
VPS36-202ENST00000462289 MXD1Q05195 221 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 CT83Q5H943 113 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 CT45A1Q5HYN5 189 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 UBE2NLQ5JXB2 153 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 ZNF660Q6AZW8 331 aaPredicted RBP4.59□□□□□ -1.67
VPS36-202ENST00000462289 FAM53AQ6NSI3 398 aaPredicted RBP4.59□□□□□ -1.67
VPS36-202ENST00000462289 CCBE1Q6UXH8 406 aaPredicted RBP4.59□□□□□ -1.67
VPS36-202ENST00000462289 ZNF833PQ6ZTB9 187 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 THNSL2Q86YJ6 484 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 IZUMO1Q8IYV9 350 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 OR4A4PQ8NGN8 299 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 OR4K15Q8NH41 348 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 OR5R1Q8NH85 324 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 OR1L1Q8NH94 360 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 CT45A3Q8NHU0 189 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 ARL11Q969Q4 196 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 MS4A7Q9GZW8 240 aaPredicted RBP4.59□□□□□ -1.67
VPS36-202ENST00000462289 MIXL1Q9H2W2 232 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 IFI27L2Q9H2X8 130 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 GHITMQ9H3K2 345 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 FAM30AQ9NZY2 134 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 DPM3Q9P2X0 92 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 SCOCQ9UIL1 159 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 VPREB3Q9UKI3 123 aa4.59□□□□□ -1.67
VPS36-202ENST00000462289 ELF5Q9UKW6 265 aaPredicted RBP4.59□□□□□ -1.67
VPS36-202ENST00000462289 IGHV3OR16-10A0A075B7F0 116 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 SMIM31A0A1B0GVY4 71 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 MEX3AA1L020 520 aaKnown RBP4.58□□□□□ -1.68
VPS36-202ENST00000462289 MEIOCA2RUB1 952 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 LEUTXA8MZ59 168 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 TRDCB7Z8K6 153 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 SLC31A2O15432 143 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 SPINT2O43291 252 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 IGLV2-14P01704 120 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 IGHV4-59P01825 116 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms