RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 HOXA5P20719 270 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 OMGP23515 440 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 S100GP29377 79 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 RAB2AP61019 212 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 HLA-DRB3P79483 266 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 HAGHQ16775 308 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 OR5P3Q8WZ94 311 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 LSM10Q969L4 123 aaKnown RBP10.49□□□□□ -0.73
COL4A6-204ENST00000461897 IL36RNQ9UBH0 155 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 WSB1Q9Y6I7 421 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 IGHV1-18A0A0C4DH31 117 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 A0A0G2JNJ9 132 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 LOC102723971A0A1B0GUV8 181 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 LINC00587B1AMM8 73 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 B4DEV8 164 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 WRBO00258 174 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 DEGS1O15121 323 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 BMP5P22003 454 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 C5orf24Q7Z6I8 188 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 ZNF429Q86V71 674 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 STX12Q86Y82 276 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 SLC25A40Q8TBP6 338 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 S100PBPQ96BU1 408 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 GPR146Q96CH1 333 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 TVP23CQ96ET8 276 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 PARD6GQ9BYG4 376 aaPredicted RBP10.49□□□□□ -0.73
COL4A6-204ENST00000461897 PKIBQ9C010 78 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 NIT2Q9NQR4 276 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 TREM2Q9NZC2 230 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 Q9UFV3 132 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 MPC1Q9Y5U8 109 aa10.49□□□□□ -0.73
COL4A6-204ENST00000461897 CACNA1AO00555 2505 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 NBEAQ8NFP9 2946 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 A0A1B0GV50 99 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 OR5B21A6NL26 309 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 ANKRD30BLA7E2S9 258 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-204ENST00000461897 TAGLN2P37802 199 aaKnown RBP10.48□□□□□ -0.73
COL4A6-204ENST00000461897 GLIPR1P48060 266 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 OR2B8PP59922 312 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 UBE2KP61086 200 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 RPL23AP62750 156 aaKnown RBP10.48□□□□□ -0.73
COL4A6-204ENST00000461897 DLK1P80370 383 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 ZNF154Q13106 437 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 PMS2P11Q13670 270 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 ELOBQ15370 118 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 C20orf204Q6ZNR8 217 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 ZNF573Q86YE8 665 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 CYB561D1Q8N8Q1 229 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 OR13D1Q8NGV5 346 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 MBD3L1Q8WWY6 194 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 NIPSNAP3BQ9BS92 247 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 PSMG3Q9BT73 122 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-204ENST00000461897 SH3BGRL2Q9UJC5 107 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 RNF150Q9ULK6 438 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 ESPL1Q14674 2120 aa10.48□□□□□ -0.73
COL4A6-204ENST00000461897 ADGRG4Q8IZF6 3080 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 TRAV24A0A0B4J272 114 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 A0A0G2JRQ6 117 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 A8MXE2 369 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 SYNGR1O43759 233 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 IGHV2-70P01814 119 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 CA6P23280 308 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 CDX1P47902 265 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-204ENST00000461897 RUNX1Q01196 453 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 ALKBH6Q3KRA9 238 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 TIMM23BQ5SRD1 257 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 UNQ6494/PRO21346Q6UXR6 183 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 MOB1BQ7L9L4 216 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 BATF2Q8N1L9 274 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 FAM169BQ8N8A8 192 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 HIST1H2AAQ96QV6 131 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 TMEM242Q9NWH2 141 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 CISD1Q9NZ45 108 aaKnown RBP10.47□□□□□ -0.73
COL4A6-204ENST00000461897 IGHV2OR16-5A0A0B4J2B6 119 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 H0YL77 283 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 IFNA5P01569 189 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 RAC2P15153 192 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 CCKARP32238 428 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 MPV17P39210 176 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 CD200P41217 278 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 GNG3P63215 75 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 PSG7Q13046 419 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 IGFBP7Q16270 282 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 TMEM217Q8N7C4 229 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 OR10J5Q8NHC4 309 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 KLF14Q8TD94 323 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-204ENST00000461897 Q8WTZ3 238 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 GPHA2Q96T91 129 aa10.47□□□□□ -0.73
COL4A6-204ENST00000461897 IQCF6A8MYZ5 107 aa10.46□□□□□ -0.74
COL4A6-204ENST00000461897 MDH2P40926 338 aaKnown RBP10.46□□□□□ -0.74
COL4A6-204ENST00000461897 RND2P52198 227 aa10.46□□□□□ -0.74
COL4A6-204ENST00000461897 FAM27E3Q08E93 113 aa10.46□□□□□ -0.74
COL4A6-204ENST00000461897 PNRC1Q12796 327 aaPredicted RBP10.46□□□□□ -0.74
COL4A6-204ENST00000461897 KIAA0141Q14154 515 aaPredicted RBP10.46□□□□□ -0.74
COL4A6-204ENST00000461897 FAM90A2PQ658T7 463 aa10.46□□□□□ -0.74
COL4A6-204ENST00000461897 FAM58AQ8N1B3 248 aa10.46□□□□□ -0.74
COL4A6-204ENST00000461897 OR10V1Q8NGI7 309 aa10.46□□□□□ -0.74
COL4A6-204ENST00000461897 NEK7Q8TDX7 302 aa10.46□□□□□ -0.74
COL4A6-204ENST00000461897 ZCCHC14Q8WYQ9 949 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms