RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 CEACAM6P40199 344 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 KIR2DS1Q14954 304 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 ODF3L1Q8IXM7 274 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 LGALS14Q8TCE9 139 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 S1PR3Q99500 378 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 RASL11BQ9BPW5 248 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 CENPOQ9BU64 300 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 PARP12Q9H0J9 701 aaKnown RBP12.2□□□□□ -0.46
VARS-219ENST00000461328 PIPOXQ9P0Z9 390 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 KCNK7Q9Y2U2 307 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 CMYA5Q8N3K9 4069 aa12.2□□□□□ -0.46
VARS-219ENST00000461328 PSMB11A5LHX3 300 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 G3V4G9 280 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 RAB27BO00194 218 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 RAB29O14966 203 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 FABP7O15540 132 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 CD83Q01151 205 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 ARL6IP1Q15041 203 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 MMDQ15546 238 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 IDNKQ5T6J7 187 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 FAM71F2Q6NXP2 309 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 ZNF833PQ6ZTB9 187 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 FOXRED2Q8IWF2 684 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 Q8N6K4 173 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 OR8H1Q8NGG4 311 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 MAFIPQ8WZ33 124 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 PHF21AQ96BD5 680 aa12.19□□□□□ -0.46
VARS-219ENST00000461328 LIN7CQ9NUP9 197 aaKnown RBP12.19□□□□□ -0.46
VARS-219ENST00000461328 BET1O15155 118 aa12.18□□□□□ -0.46
VARS-219ENST00000461328 SCGNO76038 276 aa12.18□□□□□ -0.46
VARS-219ENST00000461328 PF4V1P10720 104 aa12.18□□□□□ -0.46
VARS-219ENST00000461328 RPL39P5Q59GN2 51 aa12.18□□□□□ -0.46
VARS-219ENST00000461328 TCTEX1D4Q5JR98 221 aa12.18□□□□□ -0.46
VARS-219ENST00000461328 Q8N9W7 124 aa12.18□□□□□ -0.46
VARS-219ENST00000461328 OR4A4PQ8NGN8 299 aa12.18□□□□□ -0.46
VARS-219ENST00000461328 RBMXL1Q96E39 390 aaKnown RBP12.18□□□□□ -0.46
VARS-219ENST00000461328 ABHD14BQ96IU4 210 aa12.18□□□□□ -0.46
VARS-219ENST00000461328 NOL4LQ96MY1 436 aaPredicted RBP12.18□□□□□ -0.46
VARS-219ENST00000461328 NABP2Q9BQ15 211 aa12.18□□□□□ -0.46
VARS-219ENST00000461328 ZNF251Q9BRH9 671 aa12.18□□□□□ -0.46
VARS-219ENST00000461328 C11orf54Q9H0W9 315 aaPredicted RBP12.18□□□□□ -0.46
VARS-219ENST00000461328 ZNF230Q9UIE0 474 aaPredicted RBP12.18□□□□□ -0.46
VARS-219ENST00000461328 ZNF221Q9UK13 617 aa12.18□□□□□ -0.46
VARS-219ENST00000461328 TSSC4Q9Y5U2 329 aaPredicted RBP12.18□□□□□ -0.46
VARS-219ENST00000461328 AIREO43918 545 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 GPR12P47775 334 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 SERPINB10P48595 397 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 ACTBP60709 375 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 SLC35B1P78383 322 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 CDNFQ49AH0 187 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 SAMD5Q5TGI4 173 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 C10orf99Q6UWK7 81 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 FAM131AQ6UXB0 335 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 ZNF329Q86UD4 541 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 OR10J5Q8NHC4 309 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 CHPT1Q8WUD6 406 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 GINS4Q9BRT9 223 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 ABCG5Q9H222 651 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 RHBDL2Q9NX52 303 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 RDH8Q9NYR8 311 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 LINC00527Q9UJ94 153 aa12.17□□□□□ -0.46
VARS-219ENST00000461328 IGKV1-6A0A0C4DH72 117 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 H7C2Y5 167 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 AP4M1O00189 453 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 ITGB1BP1O14713 200 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 IGHG2P01859 326 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 GSTT2P0CG29 244 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 GSTT2BP0CG30 244 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 SOX6P35712 828 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 F2RL1P55085 397 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 GNG2P59768 71 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 LSM3P62310 102 aaKnown RBP12.16□□□□□ -0.46
VARS-219ENST00000461328 BEAN1Q3B7T3 259 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 GLDNQ6ZMI3 551 aaPredicted RBP12.16□□□□□ -0.46
VARS-219ENST00000461328 CABLES2Q9BTV7 478 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 KIAA1456Q9P272 454 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 RNF150Q9ULK6 438 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 RBM7Q9Y580 266 aaKnown RBP12.16□□□□□ -0.46
VARS-219ENST00000461328 ETV7Q9Y603 341 aa12.16□□□□□ -0.46
VARS-219ENST00000461328 TMEM235A6NFC5 223 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 OR5H14A6NHG9 310 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 NBR2O15453 112 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 RRP9O43818 475 aaKnown RBP12.15□□□□□ -0.46
VARS-219ENST00000461328 PF4P02776 101 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 CD33P20138 364 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 DTYMKP23919 212 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 SCAND1P57086 179 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 IGSF11Q5DX21 431 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 STPG2Q8N412 459 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 NUDCD2Q8WVJ2 157 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 GHITMQ9H3K2 345 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 PLSCR3Q9NRY6 295 aa12.15□□□□□ -0.46
VARS-219ENST00000461328 ZNF107Q9UII5 783 aaPredicted RBP12.15□□□□□ -0.46
VARS-219ENST00000461328 ELF5Q9UKW6 265 aaPredicted RBP12.15□□□□□ -0.46
VARS-219ENST00000461328 GSTP1P09211 210 aaKnown RBP12.14□□□□□ -0.47
VARS-219ENST00000461328 CT45A6P0DMU7 189 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 CT45A5P0DMU8 189 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 CT45A7P0DMV0 189 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 TGFBR1P36897 503 aa12.14□□□□□ -0.47
VARS-219ENST00000461328 PLGLAQ15195 96 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms