RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TMEM65Q6PI78 240 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 ASCL4Q6XD76 172 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 MOB3BQ86TA1 216 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 OR5H6Q8NGV6 325 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 OR10K1Q8NGX5 313 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 OR10X1Q8NGY0 326 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 IL17DQ8TAD2 202 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 FAM46BQ96A09 425 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 UBE2E2Q96LR5 201 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 SPATA25Q9BR10 227 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 KCNK15Q9H427 330 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 HYDINQ4G0P3 5121 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 IGKV1-12A0A0C4DH73 117 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 FAM25AB3EWG3 89 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 FAM25CB3EWG5 89 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 FAM25GB3EWG6 89 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 HPGDSO60760 199 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 IGKV1D-12P01611 117 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 IGHV3-7P01780 117 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 IFNA6P05013 189 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 ZNF44P15621 663 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 CFHR3Q02985 330 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 EBI3Q14213 229 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 DIAPH2-AS1Q14236 149 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 UTF1Q5T230 341 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 OR10K2Q6IF99 312 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 ZNF565Q8N9K5 539 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 OR2T10Q8NGZ9 312 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 DCUN1D4Q92564 292 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 EAF1Q96JC9 268 aaPredicted RBP13.37□□□□□ -0.27
TOP3A-202ENST00000461127 RASL11BQ9BPW5 248 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 HMG20AQ9NP66 347 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 IL36GQ9NZH8 169 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 RAB22AQ9UL26 194 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 PSG11Q9UQ72 335 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 VSIG4Q9Y279 399 aa13.37□□□□□ -0.27
TOP3A-202ENST00000461127 IGHV4-30-4P0DP06 118 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 GTF2F2P13984 249 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 MGMTP16455 207 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 RAB6AP20340 208 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 GLP1RP43220 463 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 RUNX1Q01196 453 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 SCN1BQ07699 218 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 FAM71E2Q8N5Q1 922 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 Q8N9W7 124 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 LEAP2Q969E1 77 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 ST6GALNAC6Q969X2 333 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 PTX4Q96A99 478 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 CMTM3Q96MX0 182 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 URM1Q9BTM9 101 aaKnown RBP13.36□□□□□ -0.27
TOP3A-202ENST00000461127 TMEM59Q9BXS4 323 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 BANF2Q9H503 90 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 RHOFQ9HBH0 211 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 RHBDL2Q9NX52 303 aa13.36□□□□□ -0.27
TOP3A-202ENST00000461127 METTL21EPA6NDL7 271 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 TMEM14DPA8MWL7 114 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 I3L521 148 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 HSD17B6O14756 317 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 APOA1P02647 267 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 GAPDHP04406 335 aaKnown RBP13.35□□□□□ -0.27
TOP3A-202ENST00000461127 TALDO1P37837 337 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 GNG10P50151 68 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 QRFPP83859 136 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 ZNF816Q0VGE8 651 aaPredicted RBP13.35□□□□□ -0.27
TOP3A-202ENST00000461127 ATXN7L3Q14CW9 347 aaPredicted RBP13.35□□□□□ -0.27
TOP3A-202ENST00000461127 ASPHD1Q5U4P2 390 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 LAX1Q8IWV1 398 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 SGPP2Q8IWX5 399 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 IZUMO1Q8IYV9 350 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 CHST4Q8NCG5 386 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 TMEM104Q8NE00 496 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 MYOZ3Q8TDC0 251 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 S100A16Q96FQ6 103 aaKnown RBP13.35□□□□□ -0.27
TOP3A-202ENST00000461127 COQ2Q96H96 371 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 SELENOIQ9C0D9 397 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 ATG5Q9H1Y0 275 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 GNB4Q9HAV0 340 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 CALYQ9NYX4 217 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 IDI2-AS1Q9NZ38 188 aa13.35□□□□□ -0.27
TOP3A-202ENST00000461127 IGHV3-72A0A0B4J1Y9 119 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 IGHV1-3A0A0C4DH29 117 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 A0A1W2PP11 408 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 RBMY1BA6NDE4 496 aaKnown RBP13.34□□□□□ -0.27
TOP3A-202ENST00000461127 RBMY1EA6NEQ0 496 aaKnown RBP13.34□□□□□ -0.27
TOP3A-202ENST00000461127 EIF4EP06730 217 aaKnown RBP13.34□□□□□ -0.27
TOP3A-202ENST00000461127 RBMY1DP0C7P1 496 aaKnown RBP13.34□□□□□ -0.27
TOP3A-202ENST00000461127 ELK1P19419 428 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 RPS27AP62979 156 aaKnown RBP13.34□□□□□ -0.27
TOP3A-202ENST00000461127 PLA2G7Q13093 441 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 UNC119Q13432 240 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 ELP2Q6IA86 826 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 OR51T1Q8NGJ9 327 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 SLC25A38Q96DW6 304 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 MRPS24Q96EL2 167 aaKnown RBP13.34□□□□□ -0.27
TOP3A-202ENST00000461127 DIRAS2Q96HU8 199 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 OR5B12Q96R08 314 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 MIXL1Q9H2W2 232 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 OR51J1Q9H342 316 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 ZNF580Q9UK33 172 aa13.34□□□□□ -0.27
TOP3A-202ENST00000461127 A8MZ25 164 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms