RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.54□□□□□ -1.36
SND1-202ENST00000461056 BEST4Q8NFU0 473 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 OR5R1Q8NH85 324 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 MCFD2Q8NI22 146 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 SETD6Q8TBK2 473 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 RTN4IP1Q8WWV3 396 aaPredicted RBP6.54□□□□□ -1.36
SND1-202ENST00000461056 IL1F10Q8WWZ1 152 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 CREB3L1Q96BA8 519 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 RBMXL1Q96E39 390 aaKnown RBP6.54□□□□□ -1.36
SND1-202ENST00000461056 MMP27Q9H306 513 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 EXTL2Q9UBQ6 330 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 GAB2Q9UQC2 676 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 TCF19Q9Y242 345 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 FAM96BQ9Y3D0 163 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 AMMECR1Q9Y4X0 333 aaPredicted RBP6.54□□□□□ -1.36
SND1-202ENST00000461056 HILPDAQ9Y5L2 63 aa6.54□□□□□ -1.36
SND1-202ENST00000461056 IGKV1D-13A0A0B4J2D9 117 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 IGHV1-3A0A0C4DH29 117 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 ZNF736B4DX44 427 aaPredicted RBP6.53□□□□□ -1.36
SND1-202ENST00000461056 SULT1C2O00338 296 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 TOR1AO14656 332 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 CTDSPLO15194 276 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 GSTZ1O43708 216 aaPredicted RBP6.53□□□□□ -1.36
SND1-202ENST00000461056 RGS11O94810 467 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 NDUFA7O95182 113 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 CD74P04233 296 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 IGKV1-13P0DP09 117 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 ZBTB25P24278 435 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 PRSS3P35030 304 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 TALDO1P37837 337 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 CEACAM3P40198 252 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 CEACAM6P40199 344 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 ETV6P41212 452 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 CBX5P45973 191 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 COMPP49747 757 aaPredicted RBP6.53□□□□□ -1.36
SND1-202ENST00000461056 RAB7AP51149 207 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 RAB13P51153 203 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 LGALS4P56470 323 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 RPL15P61313 204 aaKnown RBP6.53□□□□□ -1.36
SND1-202ENST00000461056 DGCR2P98153 550 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 ZNF79Q15937 498 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 RPL39P5Q59GN2 51 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 C16orf87Q6PH81 154 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 THNSL2Q86YJ6 484 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 SNX29P2Q8IUI4 249 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 Q8N2B8 174 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 DRAM1Q8N682 238 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 OR2AK2Q8NG84 335 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 OR6Q1Q8NGQ2 317 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 OR52I2Q8NH67 350 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 SMIM4Q8WVI0 70 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 TAF15Q92804 592 aaKnown RBP eCLIP6.53□□□□□ -1.36
SND1-202ENST00000461056 TRIM63Q969Q1 353 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 JMJD8Q96S16 334 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 SSX3Q99909 188 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 NABP2Q9BQ15 211 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 ST6GALNAC5Q9BVH7 336 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 MRPL20Q9BYC9 149 aaKnown RBP6.53□□□□□ -1.36
SND1-202ENST00000461056 PLSCR3Q9NRY6 295 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 C1RLQ9NZP8 487 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 MTFP1Q9UDX5 166 aa6.53□□□□□ -1.36
SND1-202ENST00000461056 MEIS3P1A6NDR6 274 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 FAM181BA6NEQ2 426 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 GABARAPH6UMI1 98 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 BET1O15155 118 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 WIPF1O43516 503 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 CT45A6P0DMU7 189 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 CT45A5P0DMU8 189 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 CT45A7P0DMV0 189 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 RCVRNP35243 200 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 REG1BP48304 166 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 LINC00205P59089 165 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 MRPS15P82914 257 aaKnown RBP6.52□□□□□ -1.37
SND1-202ENST00000461056 LSAMPQ13449 338 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 DYRK1AQ13627 763 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 PLA1AQ53H76 456 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 CCDC144NLQ6NUI1 221 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 DHRS11Q6UWP2 260 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 RBMS3Q6XE24 437 aaKnown RBP6.52□□□□□ -1.37
SND1-202ENST00000461056 MFSD4AQ8N468 514 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.52□□□□□ -1.37
SND1-202ENST00000461056 OR5AP2Q8NGF4 316 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 OR5AN1Q8NGI8 311 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 OR10X1Q8NGY0 326 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 OR56B4Q8NH76 319 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 WIPF2Q8TF74 440 aaPredicted RBP6.52□□□□□ -1.37
SND1-202ENST00000461056 EDARADDQ8WWZ3 215 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 DDB2Q92466 427 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 TOMM40LQ969M1 308 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 MRGPRFQ96AM1 343 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 RPEQ96AT9 228 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 ABHD14BQ96IU4 210 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 SDHCQ99643 169 aaPredicted RBP6.52□□□□□ -1.37
SND1-202ENST00000461056 C6orf62Q9GZU0 229 aaPredicted RBP6.52□□□□□ -1.37
SND1-202ENST00000461056 DPAGT1Q9H3H5 408 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 KLK11Q9UBX7 282 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 OR2W1Q9Y3N9 320 aa6.52□□□□□ -1.37
SND1-202ENST00000461056 TMEM89A2RUT3 159 aa6.51□□□□□ -1.37
SND1-202ENST00000461056 CCDC160A6NGH7 325 aa6.51□□□□□ -1.37
SND1-202ENST00000461056 FAM25AB3EWG3 89 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms