RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 RCL1Q9Y2P8 373 aaKnown RBP11.82□□□□□ -0.52
ERCC3-205ENST00000460485 ZSCAN5BA6NJL1 495 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 ADAM20O43506 726 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 ZNF737O75373 536 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 LHBP01229 141 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 HBZP02008 142 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 TAS2R30P59541 319 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 RPL23AP62750 156 aaKnown RBP11.81□□□□□ -0.52
ERCC3-205ENST00000460485 FAM209AQ5JX71 171 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 RPRMLQ8N4K4 120 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 CISD2Q8N5K1 135 aaKnown RBP11.81□□□□□ -0.52
ERCC3-205ENST00000460485 RELL2Q8NC24 303 aaPredicted RBP11.81□□□□□ -0.52
ERCC3-205ENST00000460485 DMBX1Q8NFW5 382 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 OR52M1Q8NGK5 317 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 SNRNP40Q96DI7 357 aaKnown RBP11.81□□□□□ -0.52
ERCC3-205ENST00000460485 HSD17B10Q99714 261 aaKnown RBP11.81□□□□□ -0.52
ERCC3-205ENST00000460485 GINS3Q9BRX5 216 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 PARP11Q9NR21 331 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 UFSP2Q9NUQ7 469 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 RNF7Q9UBF6 113 aa11.81□□□□□ -0.52
ERCC3-205ENST00000460485 STRAPQ9Y3F4 350 aaKnown RBP11.81□□□□□ -0.52
ERCC3-205ENST00000460485 DSCAML1Q8TD84 2053 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 KIAA2026Q5HYC2 2103 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 LRRC30A6NM36 301 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 ATP6V1G2-DDX39BF2Z307 99 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 TRIM77I1YAP6 450 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 WNT9BO14905 357 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 PSG2P11465 335 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 IRF2P14316 349 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 MUC1P15941 1255 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-205ENST00000460485 CCKARP32238 428 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 F2RL1P55085 397 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
ERCC3-205ENST00000460485 SWI5Q1ZZU3 235 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 MIDNQ504T8 468 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 RPL7L1Q6DKI1 246 aaKnown RBP11.8□□□□□ -0.52
ERCC3-205ENST00000460485 STX12Q86Y82 276 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 SPAG16Q8N0X2 631 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 DRAM1Q8N682 238 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 TMED6Q8WW62 240 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 RND1Q92730 232 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 C14orf79Q96F83 325 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 LRRC46Q96FV0 321 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 LUZP4Q9P127 313 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 FZR1Q9UM11 496 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 WSB1Q9Y6I7 421 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 CCDC168Q8NDH2 2452 aa11.8□□□□□ -0.52
ERCC3-205ENST00000460485 ODAMA1E959 279 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 K7N7A8 449 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 MED6O75586 246 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 DFFBO76075 338 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 KIR2DS2P43631 304 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 ASCL1P50553 236 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 AKR1C2P52895 323 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 EWSR1Q01844 656 aaKnown RBP eCLIP11.79□□□□□ -0.52
ERCC3-205ENST00000460485 AESQ08117 197 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 FAM27E3Q08E93 113 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 FAM74A1Q5RGS3 127 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 OR51H1Q8NH63 302 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 PCNPQ8WW12 178 aaKnown RBP11.79□□□□□ -0.52
ERCC3-205ENST00000460485 GNPNAT1Q96EK6 184 aaPredicted RBP11.79□□□□□ -0.52
ERCC3-205ENST00000460485 SDSLQ96GA7 329 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 MRPL37Q9BZE1 423 aaKnown RBP11.79□□□□□ -0.52
ERCC3-205ENST00000460485 OR2S2Q9NQN1 319 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 ASF1BQ9NVP2 202 aa11.79□□□□□ -0.52
ERCC3-205ENST00000460485 IGKV1D-17A0A075B6S4 117 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 FAM90A9PA6NNJ1 464 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 ZNF705EA8MWA4 302 aaPredicted RBP11.78□□□□□ -0.52
ERCC3-205ENST00000460485 UMAD1C9J7I0 102 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 F2RL2O00254 374 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 YPEL1O60688 119 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 CRYZL1O95825 349 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 IGLV2-14P01704 120 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 OR8U9P0C7N5 309 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 FAM157CP0CG43 387 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 RAB7AP51149 207 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 C1orf87Q8N0U7 546 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 PRR18Q8N4B5 295 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 CD177Q8N6Q3 437 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.78□□□□□ -0.52
ERCC3-205ENST00000460485 LFNGQ8NES3 379 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 OR8U1Q8NH10 309 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 ITLN1Q8WWA0 313 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 YPEL2Q96QA6 119 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 DMRTA2Q96SC8 542 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 EGLN1Q9GZT9 426 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 OR2D2Q9H210 308 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 ESRP2Q9H6T0 727 aaKnown RBP11.78□□□□□ -0.52
ERCC3-205ENST00000460485 GAB2Q9UQC2 676 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 MMP24Q9Y5R2 645 aa11.78□□□□□ -0.52
ERCC3-205ENST00000460485 AKAP9Q99996 3911 aa11.77□□□□□ -0.52
ERCC3-205ENST00000460485 PRR14LQ5THK1 2151 aa11.77□□□□□ -0.53
ERCC3-205ENST00000460485 NKX6-3A6NJ46 265 aa11.77□□□□□ -0.53
ERCC3-205ENST00000460485 TOR1AO14656 332 aa11.77□□□□□ -0.53
ERCC3-205ENST00000460485 RBFOX2O43251 390 aaKnown RBP eCLIP11.77□□□□□ -0.53
ERCC3-205ENST00000460485 SSSCA1O60232 199 aa11.77□□□□□ -0.53
ERCC3-205ENST00000460485 SPP1P10451 314 aa11.77□□□□□ -0.53
ERCC3-205ENST00000460485 CEBPDP49716 269 aaPredicted RBP11.77□□□□□ -0.53
ERCC3-205ENST00000460485 CAV2P51636 162 aa11.77□□□□□ -0.53
ERCC3-205ENST00000460485 PJVKQ0ZLH3 352 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms