RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 AHRRA9YTQ3 701 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 CD1BP29016 333 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 TGIF1Q15583 401 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 KIF26BQ2KJY2 2108 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 RSPO4Q2I0M5 234 aaPredicted RBP12.69□□□□□ -0.38
PTPRU-205ENST00000460170 FGFRL1Q8N441 504 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 MARS2Q96GW9 593 aaKnown RBP12.69□□□□□ -0.38
PTPRU-205ENST00000460170 A0A1W2PPE3 182 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 J3QR06 171 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 K7ESF4 209 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 FADS6Q8N9I5 356 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 MRPL13Q9BYD1 178 aaKnown RBP12.69□□□□□ -0.38
PTPRU-205ENST00000460170 LINC00470Q9BZP3 86 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 PARD6AQ9NPB6 346 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 RAB29O14966 203 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 CXorf1O96002 111 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 MRPL14Q6P1L8 145 aaKnown RBP12.69□□□□□ -0.38
PTPRU-205ENST00000460170 OR8G5Q8NG78 346 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 OR1L1Q8NH94 360 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 WNT2BQ93097 391 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 RAB1BQ9H0U4 201 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 OPN3Q9H1Y3 402 aaPredicted RBP12.69□□□□□ -0.38
PTPRU-205ENST00000460170 CBY3A6NI87 242 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 MPV17P39210 176 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF645Q8N7E2 425 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 IL22RA2Q969J5 263 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 IMMP1LQ96LU5 166 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 HSPB1P04792 205 aaKnown RBP12.68□□□□□ -0.38
PTPRU-205ENST00000460170 PAX6P26367 422 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 RPL31P62899 125 aaKnown RBP12.68□□□□□ -0.38
PTPRU-205ENST00000460170 ABHD14AQ9BUJ0 271 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 PRO1933Q9H354 126 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 THYN1Q9P016 225 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF785A8K8V0 405 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 SYNGR3O43761 229 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 HOXA6P31267 233 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF818PQ6ZRF7 136 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 PDPNQ86YL7 162 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 OR1L8Q8NGR8 309 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 hCG_38984A0A1B0GV85 526 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 PGA5P0DJD9 388 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 CRISP2P16562 243 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 LDLRAD3Q86YD5 345 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 OR2V2Q96R30 315 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 ICE1Q9Y2F5 2266 aa12.68□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF98A6NK75 572 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 FTH1P19P0C7X4 201 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 SUCLG1P53597 346 aaKnown RBP12.67□□□□□ -0.38
PTPRU-205ENST00000460170 OR1B1Q8NGR6 318 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 TMEM45BQ96B21 275 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 FAM157CP0CG43 387 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 LYZP61626 148 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 STPG1Q5TH74 334 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 SPNS3Q6ZMD2 512 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 ASCL5Q7RTU5 278 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 NPVFQ9HCQ7 196 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 LRRC3CA6NJW4 275 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 FAM90A26D6RGX4 464 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 DANCRP0C864 163 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 CEBPDP49716 269 aaPredicted RBP12.67□□□□□ -0.38
PTPRU-205ENST00000460170 COX19Q49B96 90 aa12.67□□□□□ -0.38
PTPRU-205ENST00000460170 TAF15Q92804 592 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPRU-205ENST00000460170 MST1P26927 711 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 CCL8P80075 99 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 C1orf185Q5T7R7 199 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 RNASEKQ6P5S7 137 aaKnown RBP12.66□□□□□ -0.38
PTPRU-205ENST00000460170 FA2HQ7L5A8 372 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF441Q8N8Z8 693 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 KLF14Q8TD94 323 aaPredicted RBP12.66□□□□□ -0.38
PTPRU-205ENST00000460170 PACRGQ96M98 296 aaPredicted RBP12.66□□□□□ -0.38
PTPRU-205ENST00000460170 FUT9Q9Y231 359 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 MSGN1A6NI15 193 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 ID4P47928 161 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 SPCS3P61009 180 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 RBKSQ9H477 322 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 SLC31A2O15432 143 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 CAMPP49913 170 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 DHRS7BQ6IAN0 325 aaPredicted RBP12.66□□□□□ -0.38
PTPRU-205ENST00000460170 RHOVQ96L33 236 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 OR4C12Q96R67 309 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 TP53RKQ96S44 253 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 GFI1Q99684 422 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 PRDM6Q9NQX0 595 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 OR51B2Q9Y5P1 312 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF646O15015 1829 aaPredicted RBP12.66□□□□□ -0.38
PTPRU-205ENST00000460170 PLXNA3P51805 1871 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 HELTA6NFD8 242 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 SP9P0CG40 484 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 TCL1AP56279 114 aa12.66□□□□□ -0.38
PTPRU-205ENST00000460170 SLC25A10Q9UBX3 287 aaPredicted RBP12.66□□□□□ -0.38
PTPRU-205ENST00000460170 PTBP3O95758 552 aaKnown RBP12.65□□□□□ -0.38
PTPRU-205ENST00000460170 LINC00271P0C7V0 271 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 MEF2BQ02080 365 aaPredicted RBP12.65□□□□□ -0.38
PTPRU-205ENST00000460170 NSUN5P2Q63ZY6 315 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 SH3BGRL3Q9H299 93 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF552Q9H707 407 aaPredicted RBP12.65□□□□□ -0.38
PTPRU-205ENST00000460170 FBLN5Q9UBX5 448 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 PITPNC1Q9UKF7 332 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 INSIG2Q9Y5U4 225 aa12.65□□□□□ -0.38
PTPRU-205ENST00000460170 PPIAL4EA0A075B759 164 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms