RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 NDPQ00604 133 aa9.48□□□□□ -0.89
GPNMB-204ENST00000459927 ECSCRQ19T08 205 aa9.48□□□□□ -0.89
GPNMB-204ENST00000459927 PPP1R27Q86WC6 154 aa9.48□□□□□ -0.89
GPNMB-204ENST00000459927 TCTEX1D1Q8N7M0 179 aa9.48□□□□□ -0.89
GPNMB-204ENST00000459927 ZFP41Q8N8Y5 198 aa9.48□□□□□ -0.89
GPNMB-204ENST00000459927 MS4A10Q96PG2 267 aa9.48□□□□□ -0.89
GPNMB-204ENST00000459927 RNF5Q99942 180 aa9.48□□□□□ -0.89
GPNMB-204ENST00000459927 FAAP24Q9BTP7 215 aa9.48□□□□□ -0.89
GPNMB-204ENST00000459927 EXOSC1Q9Y3B2 195 aaKnown RBP9.48□□□□□ -0.89
GPNMB-204ENST00000459927 BIRC6Q9NR09 4857 aa9.48□□□□□ -0.89
GPNMB-204ENST00000459927 RAB29O14966 203 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 IGHV3-11P01762 117 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 IGHV4-30-4P0DP06 118 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 MYL12AP19105 171 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 DOC2BQ14184 412 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 SRSF7Q16629 238 aaKnown RBP eCLIP9.47□□□□□ -0.89
GPNMB-204ENST00000459927 LRRC36Q1X8D7 754 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 C6orf141Q5SZD1 244 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 ZFAND6Q6FIF0 208 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 ZNF562Q6V9R5 426 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 ZNF555Q8NEP9 628 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 OR2AK2Q8NG84 335 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 GGHQ92820 318 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 SULT4A1Q9BR01 284 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 ELOVL1Q9BW60 279 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 IFI27L2Q9H2X8 130 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 EDA2RQ9HAV5 297 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 S100A14Q9HCY8 104 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 CNOT2Q9NZN8 540 aaKnown RBP9.47□□□□□ -0.89
GPNMB-204ENST00000459927 PIPOXQ9P0Z9 390 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 GHRLQ9UBU3 117 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 RNF150Q9ULK6 438 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 GAB2Q9UQC2 676 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 A3GALT2U3KPV4 340 aa9.47□□□□□ -0.89
GPNMB-204ENST00000459927 CSMD3Q7Z407 3707 aa9.46□□□□□ -0.89
GPNMB-204ENST00000459927 DYNC1I1O14576 645 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 ST8SIA5O15466 376 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 PROP1O75360 226 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 GSTP1P09211 210 aaKnown RBP9.46□□□□□ -0.9
GPNMB-204ENST00000459927 SNRPBP14678 240 aaKnown RBP9.46□□□□□ -0.9
GPNMB-204ENST00000459927 PITPNAQ00169 270 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 HMGN3Q15651 99 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 ACTBL2Q562R1 376 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 RPL39P5Q59GN2 51 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 PYHIN1Q6K0P9 492 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 FAM71F2Q6NXP2 309 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 UNQ5815/PRO19632Q6UWF5 114 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 FAM131AQ6UXB0 335 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 GLDNQ6ZMI3 551 aaPredicted RBP9.46□□□□□ -0.9
GPNMB-204ENST00000459927 LFNGQ8NES3 379 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 OR5AN1Q8NGI8 311 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 FAM46BQ96A09 425 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 NEDD4LQ96PU5 975 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 DERL3Q96Q80 235 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 CLCC1Q96S66 551 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 UQCC2Q9BRT2 126 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 AGMATQ9BSE5 352 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 FAM103A1Q9BTL3 118 aaKnown RBP9.46□□□□□ -0.9
GPNMB-204ENST00000459927 ABRACLQ9P1F3 81 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 STEAP1Q9UHE8 339 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 SLC23A1Q9UHI7 598 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 LYSTQ99698 3801 aa9.46□□□□□ -0.9
GPNMB-204ENST00000459927 STARD9Q9P2P6 4700 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 H0YJW9 148 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 IGLV1-51P01701 117 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 CD1AP06126 327 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 CD40LGP29965 261 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 VEGFCP49767 419 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 ST3GAL4Q11206 333 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 MED21Q13503 144 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 PLGLAQ15195 96 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 PSG5Q15238 335 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 ZNF880Q6PDB4 577 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 C6orf201Q7Z4U5 140 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 PQLC1Q8N2U9 271 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 IL1F10Q8WWZ1 152 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 ABHD14BQ96IU4 210 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 SLA2Q9H6Q3 261 aa9.45□□□□□ -0.9
GPNMB-204ENST00000459927 RANGRFQ9HD47 186 aaPredicted RBP9.45□□□□□ -0.9
GPNMB-204ENST00000459927 TNCP24821 2201 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 OR5H14A6NHG9 310 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 H7C2Y5 167 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 ITGB1BP1O14713 200 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 HSPA12AO43301 675 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 RBBP9O75884 186 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 NAPSAO96009 420 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 CD37P11049 281 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 CELP19835 753 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 HTR2CP28335 458 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 CEACAM6P40199 344 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 TPPP2P59282 170 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 KLF5Q13887 457 aaPredicted RBP9.44□□□□□ -0.9
GPNMB-204ENST00000459927 OR10K2Q6IF99 312 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 IL34Q6ZMJ4 242 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 HAPLN4Q86UW8 402 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 ANKRD13BQ86YJ7 626 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 ABHD5Q8WTS1 349 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 C11orf54Q9H0W9 315 aaPredicted RBP9.44□□□□□ -0.9
GPNMB-204ENST00000459927 SMPD3Q9NY59 655 aaPredicted RBP9.44□□□□□ -0.9
GPNMB-204ENST00000459927 METTL1Q9UBP6 276 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms