RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 PHF21AQ96BD5 680 aa14.83□□□□□ -0.04
USP39-209ENST00000458268 R3HDM4Q96D70 268 aa14.83□□□□□ -0.04
USP39-209ENST00000458268 S1PR3Q99500 378 aa14.83□□□□□ -0.04
USP39-209ENST00000458268 TCRBV4S1A1TA0A5B7 111 aa14.82□□□□□ -0.04
USP39-209ENST00000458268 FABP7O15540 132 aa14.82□□□□□ -0.04
USP39-209ENST00000458268 FGF16O43320 207 aa14.82□□□□□ -0.04
USP39-209ENST00000458268 GSTT2P0CG29 244 aa14.82□□□□□ -0.04
USP39-209ENST00000458268 GSTT2BP0CG30 244 aa14.82□□□□□ -0.04
USP39-209ENST00000458268 IGSF11Q5DX21 431 aa14.82□□□□□ -0.04
USP39-209ENST00000458268 ZNF329Q86UD4 541 aa14.82□□□□□ -0.04
USP39-209ENST00000458268 OR4X2Q8NGF9 303 aa14.82□□□□□ -0.04
USP39-209ENST00000458268 OR5H6Q8NGV6 325 aa14.82□□□□□ -0.04
USP39-209ENST00000458268 EDARADDQ8WWZ3 215 aa14.82□□□□□ -0.04
USP39-209ENST00000458268 NABP2Q9BQ15 211 aa14.82□□□□□ -0.04
USP39-209ENST00000458268 C11orf54Q9H0W9 315 aaPredicted RBP14.82□□□□□ -0.04
USP39-209ENST00000458268 PKD1L1Q8TDX9 2849 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 IGKV1-6A0A0C4DH72 117 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 PSMB11A5LHX3 300 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 H7C2Y5 167 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 RAB29O14966 203 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 GPR12P47775 334 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 F2RL1P55085 397 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 EBI3Q14213 229 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 KIR2DS1Q14954 304 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 FAM131AQ6UXB0 335 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 ZNF833PQ6ZTB9 187 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 Q8N6K4 173 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 NUDCD2Q8WVJ2 157 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 PTX4Q96A99 478 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 ZNF251Q9BRH9 671 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 GINS4Q9BRT9 223 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 RHBDL2Q9NX52 303 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 RDH8Q9NYR8 311 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 PIPOXQ9P0Z9 390 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 ZNF221Q9UK13 617 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 RBM7Q9Y580 266 aaKnown RBP14.81□□□□□ -0.04
USP39-209ENST00000458268 TRRAPQ9Y4A5 3859 aa14.81□□□□□ -0.04
USP39-209ENST00000458268 TMEM235A6NFC5 223 aa14.8□□□□□ -0.04
USP39-209ENST00000458268 CNTFRP26992 372 aa14.8□□□□□ -0.04
USP39-209ENST00000458268 GNG2P59768 71 aa14.8□□□□□ -0.04
USP39-209ENST00000458268 ACTBP60709 375 aa14.8□□□□□ -0.04
USP39-209ENST00000458268 C1QL4Q86Z23 238 aa14.8□□□□□ -0.04
USP39-209ENST00000458268 FOXRED2Q8IWF2 684 aa14.8□□□□□ -0.04
USP39-209ENST00000458268 Q8N9W7 124 aa14.8□□□□□ -0.04
USP39-209ENST00000458268 DRAXINQ8NBI3 349 aaPredicted RBP14.8□□□□□ -0.04
USP39-209ENST00000458268 OR4A4PQ8NGN8 299 aa14.8□□□□□ -0.04
USP39-209ENST00000458268 ST6GALNAC5Q9BVH7 336 aa14.8□□□□□ -0.04
USP39-209ENST00000458268 LINC01548A6NM66 108 aa14.79□□□□□ -0.04
USP39-209ENST00000458268 J3QRK9 145 aa14.79□□□□□ -0.04
USP39-209ENST00000458268 PF4V1P10720 104 aa14.79□□□□□ -0.04
USP39-209ENST00000458268 LY6G6FQ5SQ64 297 aa14.79□□□□□ -0.04
USP39-209ENST00000458268 NDUFA11Q86Y39 141 aa14.79□□□□□ -0.04
USP39-209ENST00000458268 OR10J5Q8NHC4 309 aa14.79□□□□□ -0.04
USP39-209ENST00000458268 YIPF6Q96EC8 236 aa14.79□□□□□ -0.04
USP39-209ENST00000458268 LIN7CQ9NUP9 197 aaKnown RBP14.79□□□□□ -0.04
USP39-209ENST00000458268 OPN1MWP04001 364 aa14.78□□□□□ -0.04
USP39-209ENST00000458268 OR8U9P0C7N5 309 aa14.78□□□□□ -0.04
USP39-209ENST00000458268 OPN1MW2P0DN77 364 aa14.78□□□□□ -0.04
USP39-209ENST00000458268 OPN1MW3P0DN78 364 aa14.78□□□□□ -0.04
USP39-209ENST00000458268 ARL6IP1Q15041 203 aa14.78□□□□□ -0.04
USP39-209ENST00000458268 PLGLAQ15195 96 aa14.78□□□□□ -0.04
USP39-209ENST00000458268 OR8U1Q8NH10 309 aa14.78□□□□□ -0.04
USP39-209ENST00000458268 WIPF2Q8TF74 440 aaPredicted RBP14.78□□□□□ -0.04
USP39-209ENST00000458268 RITA1Q96K30 269 aa14.78□□□□□ -0.04
USP39-209ENST00000458268 HSPB9Q9BQS6 159 aa14.78□□□□□ -0.04
USP39-209ENST00000458268 OR2D2Q9H210 308 aa14.78□□□□□ -0.04
USP39-209ENST00000458268 KIAA1456Q9P272 454 aa14.78□□□□□ -0.04
USP39-209ENST00000458268 TRAV18A0A075B6X5 111 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 IGKV1D-8A0A087WSZ0 117 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 M0R1X1 148 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 SCGNO76038 276 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 FCER2P06734 321 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 GSTP1P09211 210 aaKnown RBP14.77□□□□□ -0.05
USP39-209ENST00000458268 CT45A6P0DMU7 189 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 CT45A5P0DMU8 189 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 CT45A7P0DMV0 189 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 SOX6P35712 828 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 SERPINB10P48595 397 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 SLC35B1P78383 322 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 TCTEX1D4Q5JR98 221 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 OR4F17Q8NGA8 305 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 OR8H1Q8NGG4 311 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 CHPT1Q8WUD6 406 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 OR4F4Q96R69 305 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 ABCG5Q9H222 651 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 PLSCR3Q9NRY6 295 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 ETV7Q9Y603 341 aa14.77□□□□□ -0.05
USP39-209ENST00000458268 AP4M1O00189 453 aa14.76□□□□□ -0.05
USP39-209ENST00000458268 NBR2O15453 112 aa14.76□□□□□ -0.05
USP39-209ENST00000458268 RRP9O43818 475 aaKnown RBP14.76□□□□□ -0.05
USP39-209ENST00000458268 IGHG2P01859 326 aa14.76□□□□□ -0.05
USP39-209ENST00000458268 LINC00205P59089 165 aa14.76□□□□□ -0.05
USP39-209ENST00000458268 CD83Q01151 205 aa14.76□□□□□ -0.05
USP39-209ENST00000458268 HACD4Q5VWC8 232 aa14.76□□□□□ -0.05
USP39-209ENST00000458268 STPG2Q8N412 459 aa14.76□□□□□ -0.05
USP39-209ENST00000458268 ABHD5Q8WTS1 349 aa14.76□□□□□ -0.05
USP39-209ENST00000458268 SLC25A38Q96DW6 304 aa14.76□□□□□ -0.05
USP39-209ENST00000458268 CABLES2Q9BTV7 478 aa14.76□□□□□ -0.05
USP39-209ENST00000458268 FUNDC2Q9BWH2 189 aa14.76□□□□□ -0.05
USP39-209ENST00000458268 ZNF107Q9UII5 783 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms