RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CX3CL1P78423 397 aa16.64■□□□□ 0.25
CPNE1-220ENST00000458038 PLGLAQ15195 96 aa16.64■□□□□ 0.25
CPNE1-220ENST00000458038 ECSCRQ19T08 205 aa16.64■□□□□ 0.25
CPNE1-220ENST00000458038 LRRC36Q1X8D7 754 aa16.64■□□□□ 0.25
CPNE1-220ENST00000458038 AKIRIN2Q53H80 203 aa16.64■□□□□ 0.25
CPNE1-220ENST00000458038 CYGBQ8WWM9 190 aa16.64■□□□□ 0.25
CPNE1-220ENST00000458038 FLYWCH2Q96CP2 140 aaKnown RBP16.64■□□□□ 0.25
CPNE1-220ENST00000458038 IFI27L2Q9H2X8 130 aa16.64■□□□□ 0.25
CPNE1-220ENST00000458038 SLC23A1Q9UHI7 598 aa16.64■□□□□ 0.25
CPNE1-220ENST00000458038 ITGB1BP1O14713 200 aa16.63■□□□□ 0.25
CPNE1-220ENST00000458038 HSPB1P04792 205 aaKnown RBP16.63■□□□□ 0.25
CPNE1-220ENST00000458038 FRMD6-AS1P0C7T7 363 aa16.63■□□□□ 0.25
CPNE1-220ENST00000458038 FAM131AQ6UXB0 335 aa16.63■□□□□ 0.25
CPNE1-220ENST00000458038 IL1F10Q8WWZ1 152 aa16.63■□□□□ 0.25
CPNE1-220ENST00000458038 OR4C12Q96R67 309 aa16.63■□□□□ 0.25
CPNE1-220ENST00000458038 SULT4A1Q9BR01 284 aa16.63■□□□□ 0.25
CPNE1-220ENST00000458038 TPSG1Q9NRR2 321 aa16.63■□□□□ 0.25
CPNE1-220ENST00000458038 TENM2Q9NT68 2774 aa16.63■□□□□ 0.25
CPNE1-220ENST00000458038 PNMA8CA0A1B0GUJ8 204 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 SOX15O60248 233 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 GSTP1P09211 210 aaKnown RBP16.62■□□□□ 0.25
CPNE1-220ENST00000458038 LYL1P12980 280 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 SLURP1P55000 103 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 WNT4P56705 351 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 RPS27AP62979 156 aaKnown RBP16.62■□□□□ 0.25
CPNE1-220ENST00000458038 GLT8D1Q68CQ7 371 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 MOB1BQ7L9L4 216 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 DHRSXQ8N5I4 330 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 KCNG3Q8TAE7 436 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 FAAP24Q9BTP7 215 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 ALX4Q9H161 411 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-220ENST00000458038 RIMS4Q9H426 269 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-220ENST00000458038 FBXL15Q9H469 300 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 SLA2Q9H6Q3 261 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 FBXO7Q9Y3I1 522 aa16.62■□□□□ 0.25
CPNE1-220ENST00000458038 MYL12BO14950 172 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 NAPSAO96009 420 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 CT45A6P0DMU7 189 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 CT45A5P0DMU8 189 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 CT45A7P0DMV0 189 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 PITPNAQ00169 270 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 NDPQ00604 133 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 ACTBL2Q562R1 376 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 ZNF562Q6V9R5 426 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 C5orf24Q7Z6I8 188 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 MS4A15Q8N5U1 240 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 PACRGLQ8N7B6 248 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 PHYHIPQ92561 330 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 ELOVL1Q9BW60 279 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 TMEM59Q9BXS4 323 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 MGAT4AQ9UM21 535 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 WASHC3Q9Y3C0 194 aa16.61■□□□□ 0.25
CPNE1-220ENST00000458038 IGHV4OR15-8A0A075B7B6 117 aa16.6■□□□□ 0.25
CPNE1-220ENST00000458038 A0A087WW49 117 aa16.6■□□□□ 0.25
CPNE1-220ENST00000458038 EGR2P11161 476 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-220ENST00000458038 C1orf100Q5SVJ3 147 aa16.6■□□□□ 0.25
CPNE1-220ENST00000458038 ZNF880Q6PDB4 577 aa16.6■□□□□ 0.25
CPNE1-220ENST00000458038 OVCH2Q7RTZ1 564 aa16.6■□□□□ 0.25
CPNE1-220ENST00000458038 C6orf201Q7Z4U5 140 aa16.6■□□□□ 0.25
CPNE1-220ENST00000458038 PPP1R27Q86WC6 154 aa16.6■□□□□ 0.25
CPNE1-220ENST00000458038 SVOPQ8N4V2 548 aa16.6■□□□□ 0.25
CPNE1-220ENST00000458038 OR5AN1Q8NGI8 311 aa16.6■□□□□ 0.25
CPNE1-220ENST00000458038 ABHD5Q8WTS1 349 aa16.6■□□□□ 0.25
CPNE1-220ENST00000458038 EDARADDQ8WWZ3 215 aa16.6■□□□□ 0.25
CPNE1-220ENST00000458038 CHMP1AQ9HD42 196 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-220ENST00000458038 DNAH7Q8WXX0 4024 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 HUWE1Q7Z6Z7 4374 aaKnown RBP16.59■□□□□ 0.25
CPNE1-220ENST00000458038 H0YJW9 148 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 H7C2Y5 167 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 ST8SIA5O15466 376 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 TFAP2AP05549 437 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 UNQ5815/PRO19632Q6UWF5 114 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 ARPC1AQ92747 370 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 CITED4Q96RK1 184 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 AGMATQ9BSE5 352 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 TM2D1Q9BX74 207 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 PLCXD1Q9NUJ7 323 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 PLEKHJ1Q9NW61 149 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 PSORS1C1Q9UIG5 152 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 A3GALT2U3KPV4 340 aa16.59■□□□□ 0.25
CPNE1-220ENST00000458038 TRBV6-6A0A0A6YYG2 114 aa16.58■□□□□ 0.24
CPNE1-220ENST00000458038 FCN1O00602 326 aa16.58■□□□□ 0.24
CPNE1-220ENST00000458038 ZBTB25P24278 435 aa16.58■□□□□ 0.24
CPNE1-220ENST00000458038 RPL39P5Q59GN2 51 aa16.58■□□□□ 0.24
CPNE1-220ENST00000458038 NANOGP1Q8N7R0 232 aa16.58■□□□□ 0.24
CPNE1-220ENST00000458038 RHOVQ96L33 236 aa16.58■□□□□ 0.24
CPNE1-220ENST00000458038 TSNAXQ99598 290 aaKnown RBP16.58■□□□□ 0.24
CPNE1-220ENST00000458038 PALMDQ9NP74 551 aa16.58■□□□□ 0.24
CPNE1-220ENST00000458038 STUB1Q9UNE7 303 aa16.58■□□□□ 0.24
CPNE1-220ENST00000458038 SLC22A1O15245 554 aa16.57■□□□□ 0.24
CPNE1-220ENST00000458038 HSPA12AO43301 675 aa16.57■□□□□ 0.24
CPNE1-220ENST00000458038 SPDEFO95238 335 aa16.57■□□□□ 0.24
CPNE1-220ENST00000458038 BPNT1O95861 308 aa16.57■□□□□ 0.24
CPNE1-220ENST00000458038 HTR2CP28335 458 aa16.57■□□□□ 0.24
CPNE1-220ENST00000458038 ACSM3Q53FZ2 586 aa16.57■□□□□ 0.24
CPNE1-220ENST00000458038 C8orf59Q8N0T1 100 aaPredicted RBP16.57■□□□□ 0.24
CPNE1-220ENST00000458038 METTL1Q9UBP6 276 aaKnown RBP16.57■□□□□ 0.24
CPNE1-220ENST00000458038 TNCP24821 2201 aa16.57■□□□□ 0.24
CPNE1-220ENST00000458038 TRIM64CA6NLI5 447 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 A8MZ25 164 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms