RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 FOXA2Q9Y261 457 aaPredicted RBP9.12□□□□□ -0.95
LMCD1-206ENST00000456506 MRPS28Q9Y2Q9 187 aaKnown RBP9.12□□□□□ -0.95
LMCD1-206ENST00000456506 TRBV5-7A0A0A0MS05 114 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 A0A1W2PN81 502 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 FAM90A7PA6NKC0 464 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 FAM90A23PA8MXZ1 464 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 YPEL1O60688 119 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 CA11O75493 328 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 SMIM18P0DKX4 95 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 FSTP19883 344 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 CHRNA7P36544 502 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 PPP3R1P63098 170 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 CX3CL1P78423 397 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 GPR176Q14439 515 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 SRSF7Q16629 238 aaKnown RBP eCLIP9.11□□□□□ -0.95
LMCD1-206ENST00000456506 ECSCRQ19T08 205 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 RNLSQ5VYX0 342 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 ZNF660Q6AZW8 331 aaPredicted RBP9.11□□□□□ -0.95
LMCD1-206ENST00000456506 DMKNQ6E0U4 476 aaPredicted RBP9.11□□□□□ -0.95
LMCD1-206ENST00000456506 ZNF485Q8NCK3 441 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 MUL1Q969V5 352 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 RHOVQ96L33 236 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 Q96M66 194 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 YPEL2Q96QA6 119 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 OR14A2Q96R54 314 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 SCN3BQ9NY72 215 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 GAB2Q9UQC2 676 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 TPRKBQ9Y3C4 175 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 PEX16Q9Y5Y5 336 aa9.11□□□□□ -0.95
LMCD1-206ENST00000456506 A0A087WXM4 84 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 HSPB1P04792 205 aaKnown RBP9.1□□□□□ -0.95
LMCD1-206ENST00000456506 GLAP06280 429 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 DOC2BQ14184 412 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 HMGN3Q15651 99 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 FAM71F2Q6NXP2 309 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 GLIPR1L1Q6UWM5 242 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 FAM131AQ6UXB0 335 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 IL34Q6ZMJ4 242 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 TCTEX1D1Q8N7M0 179 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 TSPAN14Q8NG11 270 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 GGHQ92820 318 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 GHSRQ92847 366 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 S100A13Q99584 98 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 MRPS26Q9BYN8 205 aaKnown RBP9.1□□□□□ -0.95
LMCD1-206ENST00000456506 CST11Q9H112 138 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 FBXL15Q9H469 300 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 BANF2Q9H503 90 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 RAB9BQ9NP90 201 aa9.1□□□□□ -0.95
LMCD1-206ENST00000456506 CHCHD3Q9NX63 227 aaKnown RBP9.1□□□□□ -0.95
LMCD1-206ENST00000456506 RPL36Q9Y3U8 105 aaKnown RBP9.1□□□□□ -0.95
LMCD1-206ENST00000456506 UBE2QL1A1L167 161 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 EFCAB10A6NFE3 127 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 RRHO14718 337 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 HSPA12AO43301 675 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 PROP1O75360 226 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 IGHV3-11P01762 117 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 CT45A6P0DMU7 189 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 CT45A5P0DMU8 189 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 CT45A7P0DMV0 189 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 MGMTP16455 207 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 FUT3P21217 361 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 SSBP2P81877 361 aaPredicted RBP9.09□□□□□ -0.95
LMCD1-206ENST00000456506 PITPNAQ00169 270 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 Q499Y3 187 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 AKIRIN2Q53H80 203 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 ZNF773Q6PK81 442 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 PRSS48Q7RTY5 328 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 CDH26Q8IXH8 852 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 BPIFB6Q8NFQ5 453 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 ISOC1Q96CN7 298 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 GHITMQ9H3K2 345 aa9.09□□□□□ -0.95
LMCD1-206ENST00000456506 IRGMA1A4Y4 181 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 H0YJW9 148 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 PDCD6O75340 191 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 MAS1P04201 325 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 TFAP2AP05549 437 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 ALDH3B2P48448 385 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 IRF3Q14653 427 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 HAGHQ16775 308 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 YIF1BQ5BJH7 314 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 PYHIN1Q6K0P9 492 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 ZNF880Q6PDB4 577 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 OR5AN1Q8NGI8 311 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 FLYWCH2Q96CP2 140 aaKnown RBP9.08□□□□□ -0.96
LMCD1-206ENST00000456506 SULT4A1Q9BR01 284 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 FAM103A1Q9BTL3 118 aaKnown RBP9.08□□□□□ -0.96
LMCD1-206ENST00000456506 SELENOIQ9C0D9 397 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 PARP12Q9H0J9 701 aaKnown RBP9.08□□□□□ -0.96
LMCD1-206ENST00000456506 BATF3Q9NR55 127 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 BABAM2Q9NXR7 383 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 KIAA1456Q9P272 454 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 CLEC2DQ9UHP7 191 aa9.08□□□□□ -0.96
LMCD1-206ENST00000456506 ST8SIA5O15466 376 aa9.07□□□□□ -0.96
LMCD1-206ENST00000456506 RGS10O43665 173 aa9.07□□□□□ -0.96
LMCD1-206ENST00000456506 CDK1P06493 297 aa9.07□□□□□ -0.96
LMCD1-206ENST00000456506 DCKP27707 260 aa9.07□□□□□ -0.96
LMCD1-206ENST00000456506 RPL5P46777 297 aaKnown RBP9.07□□□□□ -0.96
LMCD1-206ENST00000456506 RPL39P5Q59GN2 51 aa9.07□□□□□ -0.96
LMCD1-206ENST00000456506 AWAT2Q6E213 333 aa9.07□□□□□ -0.96
LMCD1-206ENST00000456506 GLDNQ6ZMI3 551 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms