RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CASQ2O14958 399 aaPredicted RBP12.4□□□□□ -0.42
GPC1-206ENST00000455111 SLC22A1O15245 554 aa12.4□□□□□ -0.42
GPC1-206ENST00000455111 SLURP1P55000 103 aa12.4□□□□□ -0.42
GPC1-206ENST00000455111 C8orf59Q8N0T1 100 aaPredicted RBP12.4□□□□□ -0.42
GPC1-206ENST00000455111 DLX4Q92988 240 aaPredicted RBP12.4□□□□□ -0.42
GPC1-206ENST00000455111 ABHD14BQ96IU4 210 aa12.4□□□□□ -0.42
GPC1-206ENST00000455111 LPAR5Q9H1C0 372 aa12.4□□□□□ -0.42
GPC1-206ENST00000455111 OR1A1Q9P1Q5 309 aa12.4□□□□□ -0.42
GPC1-206ENST00000455111 GHRLQ9UBU3 117 aa12.4□□□□□ -0.42
GPC1-206ENST00000455111 ZNF256Q9Y2P7 627 aaPredicted RBP12.4□□□□□ -0.42
GPC1-206ENST00000455111 SOCS1O15524 211 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 CDK1P06493 297 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 SSBP2P81877 361 aaPredicted RBP12.39□□□□□ -0.43
GPC1-206ENST00000455111 GABPB1Q06547 395 aaPredicted RBP12.39□□□□□ -0.43
GPC1-206ENST00000455111 PLA2G7Q13093 441 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 MED21Q13503 144 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 IRF3Q14653 427 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 LIN54Q6MZP7 749 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 TMEM91Q6ZNR0 172 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 GALMQ96C23 342 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 CHCHD6Q9BRQ6 235 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 TMED9Q9BVK6 235 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 KCNIP1Q9NZI2 227 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 VSIG4Q9Y279 399 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 NUBP2Q9Y5Y2 271 aa12.39□□□□□ -0.43
GPC1-206ENST00000455111 IGHV4OR15-8A0A075B7B6 117 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 A0A087WW49 117 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 IGKV1-6A0A0C4DH72 117 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 H0YJW9 148 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 UCHL1P09936 223 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 NHLRC4P0CG21 123 aaPredicted RBP12.38□□□□□ -0.43
GPC1-206ENST00000455111 TMEM50BP56557 158 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 CX3CL1P78423 397 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 ZNF616Q08AN1 781 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 RBM48Q5RL73 367 aaKnown RBP12.38□□□□□ -0.43
GPC1-206ENST00000455111 RNLSQ5VYX0 342 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 SBSPONQ8IVN8 264 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 IL1F10Q8WWZ1 152 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 FAM103A1Q9BTL3 118 aaKnown RBP12.38□□□□□ -0.43
GPC1-206ENST00000455111 TMEM59Q9BXS4 323 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 TOLLIPQ9H0E2 274 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 CST11Q9H112 138 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 RAB9BQ9NP90 201 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 AK3Q9UIJ7 227 aa12.38□□□□□ -0.43
GPC1-206ENST00000455111 CSMD3Q7Z407 3707 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 A0A1W2PN81 502 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 RRHO14718 337 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 OR8U8P0C7N1 319 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 OR5H8P0DN80 308 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 MAPK3P27361 379 aaPredicted RBP12.37□□□□□ -0.43
GPC1-206ENST00000455111 CHRNA7P36544 502 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 FAM71F2Q6NXP2 309 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 FAM89BQ8N5H3 189 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 OR2AK2Q8NG84 335 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 PHYHIPQ92561 330 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 C11orf54Q9H0W9 315 aaPredicted RBP12.37□□□□□ -0.43
GPC1-206ENST00000455111 ISYNA1Q9NPH2 558 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 C8orf4Q9NR00 106 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 NKX1-2Q9UD57 310 aaPredicted RBP12.37□□□□□ -0.43
GPC1-206ENST00000455111 SLC23A1Q9UHI7 598 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 STAB2Q8WWQ8 2551 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 LYSTQ99698 3801 aa12.37□□□□□ -0.43
GPC1-206ENST00000455111 EPPK1P58107 5090 aaKnown RBP12.37□□□□□ -0.43
GPC1-206ENST00000455111 TRBV6-6A0A0A6YYG2 114 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 ANKRD65E5RJM6 399 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 SCTP09683 121 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 UBBP0CG47 229 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 SRMP19623 302 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 RPS25P62851 125 aaKnown RBP12.36□□□□□ -0.43
GPC1-206ENST00000455111 P2RY14Q15391 338 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 CEACAM19Q7Z692 300 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 HAPLN4Q86UW8 402 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 ZNF383Q8NA42 475 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 DRAXINQ8NBI3 349 aaPredicted RBP12.36□□□□□ -0.43
GPC1-206ENST00000455111 OR5AN1Q8NGI8 311 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 C5orf30Q96GV9 206 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 NEDD4LQ96PU5 975 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 HYDINQ4G0P3 5121 aa12.36□□□□□ -0.43
GPC1-206ENST00000455111 OVOL1O14753 267 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 ARPC1BO15143 372 aaKnown RBP12.35□□□□□ -0.43
GPC1-206ENST00000455111 IGKV1-16P04430 117 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 SPNP16150 400 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 HLA-DRB3P79483 266 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 DCTN2Q13561 401 aaKnown RBP12.35□□□□□ -0.43
GPC1-206ENST00000455111 PSG5Q15238 335 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 PLAC9Q5JTB6 97 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 GLT8D1Q68CQ7 371 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 ZNF660Q6AZW8 331 aaPredicted RBP12.35□□□□□ -0.43
GPC1-206ENST00000455111 CD200R1LQ6Q8B3 271 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 KCNG3Q8TAE7 436 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 NRG4Q8WWG1 115 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 CLCC1Q96S66 551 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 PIPOXQ9P0Z9 390 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 ZMAT5Q9UDW3 170 aaKnown RBP12.35□□□□□ -0.43
GPC1-206ENST00000455111 ERGIC3Q9Y282 383 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 A3GALT2U3KPV4 340 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 DNAH1Q9P2D7 4330 aa12.35□□□□□ -0.43
GPC1-206ENST00000455111 SORL1Q92673 2214 aa12.34□□□□□ -0.43
GPC1-206ENST00000455111 TRIM64CA6NLI5 447 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms