RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 CCL28Q9NRJ3 127 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 GNG12Q9UBI6 72 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 ZNF69Q9UC07 566 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 PSG11Q9UQ72 335 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 POLR3KQ9Y2Y1 108 aaPredicted RBP8.97□□□□□ -0.97
SCN9A-205ENST00000454569 C7orf66A4D0T2 115 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 YPEL1O60688 119 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 FOXH1O75593 365 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 RLN1P04808 185 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 HNRNPCP07910 306 aaKnown RBP eCLIP8.96□□□□□ -0.97
SCN9A-205ENST00000454569 CTXN2P0C2S0 81 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 OR8U9P0C7N5 309 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 VSIG10L2P0DP72 767 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 MMP9P14780 707 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 GNRHRP30968 328 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 LDLRAD2Q5SZI1 272 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 CD276Q5ZPR3 534 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 PDZD9Q8IXQ8 264 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 PNKDQ8N490 385 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 OR8U1Q8NH10 309 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 TNFRSF14Q92956 283 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 MOB3AQ96BX8 217 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 MSI2Q96DH6 328 aaKnown RBP8.96□□□□□ -0.97
SCN9A-205ENST00000454569 YPEL2Q96QA6 119 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 NEURL2Q9BR09 285 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 AGMATQ9BSE5 352 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 GAL3ST2Q9H3Q3 398 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 C5orf66Q9H5L9 145 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 LPAR3Q9UBY5 353 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 ZNF221Q9UK13 617 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 JPT1Q9UK76 154 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 GPR132Q9UNW8 380 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 OR2W1Q9Y3N9 320 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 INSIG2Q9Y5U4 225 aa8.96□□□□□ -0.97
SCN9A-205ENST00000454569 A0A0A6YYJ9 748 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 A0A1W2PRD5 423 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 A0A1W2PRF3 423 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 A0A1W2PRM7 423 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 HMX3A6NHT5 357 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 HSD17B6O14756 317 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 TRAPPC2P0DI81 140 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 TRAPPC2BP0DI82 140 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 IGHV4-31P0DP07 118 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 ANXA7P20073 488 aaKnown RBP8.95□□□□□ -0.98
SCN9A-205ENST00000454569 DVL1P1P54792 670 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-205ENST00000454569 DIAPH2-AS1Q14236 149 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 ZNF818PQ6ZRF7 136 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 IQCF2Q8IXL9 164 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 ODF3L1Q8IXM7 274 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 SECTM1Q8WVN6 248 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 CAPSLQ8WWF8 208 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 TMEM230Q96A57 120 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 TBX15Q96SF7 602 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 RNASEK-C17orf49H0YIS7 233 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 SMAD7O15105 426 aaKnown RBP8.95□□□□□ -0.98
SCN9A-205ENST00000454569 ENSAO43768 121 aaKnown RBP8.95□□□□□ -0.98
SCN9A-205ENST00000454569 DIRAS3O95661 229 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 MSMBP08118 114 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 COX7A1P24310 79 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 PAX6P26367 422 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 MECP2P51608 486 aaKnown RBP8.95□□□□□ -0.98
SCN9A-205ENST00000454569 RRAS2P62070 204 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-205ENST00000454569 PAX8Q06710 450 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 TMEM249Q2WGJ8 235 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 VMO1Q7Z5L0 202 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 TMED4Q7Z7H5 227 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 ZDHHC22Q8N966 263 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 OR52M1Q8NGK5 317 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 SLC5A7Q9GZV3 580 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 TMEM133Q9H2Q1 129 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 IFI27L2Q9H2X8 130 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 GHITMQ9H3K2 345 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 GPN1Q9HCN4 374 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-205ENST00000454569 SESN1Q9Y6P5 492 aa8.95□□□□□ -0.98
SCN9A-205ENST00000454569 A0A087X0M5 115 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 A0A1B0GX30 115 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 TNFSF12O43508 249 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 CCNKO75909 580 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 PGAM2P15259 253 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 PHLDA2Q53GA4 152 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 RPL39P5Q59GN2 51 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 GLDNQ6ZMI3 551 aaPredicted RBP8.94□□□□□ -0.98
SCN9A-205ENST00000454569 SLC25A48Q6ZT89 311 aaKnown RBP8.94□□□□□ -0.98
SCN9A-205ENST00000454569 ABHD12Q8N2K0 398 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 OR10A7Q8NGE5 316 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 OR52B4Q8NGK2 314 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 PCGF1Q9BSM1 259 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 MED28Q9H204 178 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 OR2D2Q9H210 308 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 OR51J1Q9H342 316 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 PRR13Q9NZ81 148 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 MXRA5Q9NR99 2828 aa8.94□□□□□ -0.98
SCN9A-205ENST00000454569 SONP18583 2426 aaKnown RBP8.93□□□□□ -0.98
SCN9A-205ENST00000454569 IGHV2-26A0A0B4J1V2 119 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 B4DSR2 109 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 BOLA2-SMG1P6H3BVE0 249 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 J3QR06 171 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 M0R1W7 72 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 SSNA1O43805 119 aa8.93□□□□□ -0.98
SCN9A-205ENST00000454569 CREBL2O60519 120 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms