RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TMEM11P17152 192 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 PITPNAQ00169 270 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 SRSF4Q08170 494 aaKnown RBP11.28□□□□□ -0.6
HDAC4-205ENST00000454542 ARFRP1Q13795 201 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 UBE2NLQ5JXB2 153 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 MOB3BQ86TA1 216 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 C5orf56Q8N8D9 126 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 NUDCD2Q8WVJ2 157 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 MAFIPQ8WZ33 124 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 EAF1Q96JC9 268 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-205ENST00000454542 NABP2Q9BQ15 211 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 MRPL20Q9BYC9 149 aaKnown RBP11.28□□□□□ -0.6
HDAC4-205ENST00000454542 C11orf54Q9H0W9 315 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-205ENST00000454542 DCSTAMPQ9H295 470 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 GHITMQ9H3K2 345 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 PIPOXQ9P0Z9 390 aa11.28□□□□□ -0.6
HDAC4-205ENST00000454542 ZNF230Q9UIE0 474 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-205ENST00000454542 IGHV3-72A0A0B4J1Y9 119 aa11.27□□□□□ -0.61
HDAC4-205ENST00000454542 ZNF736B4DX44 427 aaPredicted RBP11.27□□□□□ -0.61
HDAC4-205ENST00000454542 RAB29O14966 203 aa11.27□□□□□ -0.61
HDAC4-205ENST00000454542 GSTT2P0CG29 244 aa11.27□□□□□ -0.61
HDAC4-205ENST00000454542 GSTT2BP0CG30 244 aa11.27□□□□□ -0.61
HDAC4-205ENST00000454542 OR3A3P47888 321 aa11.27□□□□□ -0.61
HDAC4-205ENST00000454542 TMEM95Q3KNT9 176 aa11.27□□□□□ -0.61
HDAC4-205ENST00000454542 IGSF11Q5DX21 431 aa11.27□□□□□ -0.61
HDAC4-205ENST00000454542 GPR141Q7Z602 305 aa11.27□□□□□ -0.61
HDAC4-205ENST00000454542 KLHDC1Q8N7A1 406 aa11.27□□□□□ -0.61
HDAC4-205ENST00000454542 RDH8Q9NYR8 311 aa11.27□□□□□ -0.61
HDAC4-205ENST00000454542 FBN3Q75N90 2809 aa11.27□□□□□ -0.61
HDAC4-205ENST00000454542 HSPA12AO43301 675 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 XRCC3O43542 346 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 PROP1O75360 226 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 CEACAM6P40199 344 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 GNG2P59768 71 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 HES1Q14469 280 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 PRR31Q5SQ13 230 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 GPR107Q5VW38 600 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 OR2T10Q8NGZ9 312 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 SGMS2Q8NHU3 365 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 CMTM3Q96MX0 182 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 AUNIPQ9H7T9 357 aa11.26□□□□□ -0.61
HDAC4-205ENST00000454542 TRAV18A0A075B6X5 111 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 MOSP00540 346 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 TALDO1P37837 337 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 VDAC2P45880 294 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-205ENST00000454542 ABCA11PQ4W5N1 156 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 RPL39P5Q59GN2 51 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 H1FOOQ8IZA3 346 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-205ENST00000454542 FAM71E2Q8N5Q1 922 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 SAMD12Q8N8I0 201 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 Q8N9W7 124 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-205ENST00000454542 OR8H1Q8NGG4 311 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 C5orf30Q96GV9 206 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 ABHD14BQ96IU4 210 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 BCL7BQ9BQE9 202 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 PLSCR3Q9NRY6 295 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 ANAPC10Q9UM13 185 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 GAB2Q9UQC2 676 aa11.25□□□□□ -0.61
HDAC4-205ENST00000454542 OR5H14A6NHG9 310 aa11.24□□□□□ -0.61
HDAC4-205ENST00000454542 SH2D7A6NKC9 451 aaPredicted RBP11.24□□□□□ -0.61
HDAC4-205ENST00000454542 BET1O15155 118 aa11.24□□□□□ -0.61
HDAC4-205ENST00000454542 CT45A6P0DMU7 189 aa11.24□□□□□ -0.61
HDAC4-205ENST00000454542 CT45A5P0DMU8 189 aa11.24□□□□□ -0.61
HDAC4-205ENST00000454542 CT45A7P0DMV0 189 aa11.24□□□□□ -0.61
HDAC4-205ENST00000454542 OR5AN1Q8NGI8 311 aa11.24□□□□□ -0.61
HDAC4-205ENST00000454542 OR10J5Q8NHC4 309 aa11.24□□□□□ -0.61
HDAC4-205ENST00000454542 ACOT12Q8WYK0 555 aa11.24□□□□□ -0.61
HDAC4-205ENST00000454542 PHF21AQ96BD5 680 aa11.24□□□□□ -0.61
HDAC4-205ENST00000454542 S1PR3Q99500 378 aa11.24□□□□□ -0.61
HDAC4-205ENST00000454542 DIABLOQ9NR28 239 aa11.24□□□□□ -0.61
HDAC4-205ENST00000454542 LIN7CQ9NUP9 197 aaKnown RBP11.24□□□□□ -0.61
HDAC4-205ENST00000454542 H0YJW9 148 aa11.23□□□□□ -0.61
HDAC4-205ENST00000454542 IGHG2P01859 326 aa11.23□□□□□ -0.61
HDAC4-205ENST00000454542 APOA1P02647 267 aa11.23□□□□□ -0.61
HDAC4-205ENST00000454542 EIF4EP06730 217 aaKnown RBP11.23□□□□□ -0.61
HDAC4-205ENST00000454542 RPL5P46777 297 aaKnown RBP11.23□□□□□ -0.61
HDAC4-205ENST00000454542 TAS2R20P59543 309 aa11.23□□□□□ -0.61
HDAC4-205ENST00000454542 HNF4GQ14541 408 aa11.23□□□□□ -0.61
HDAC4-205ENST00000454542 CNIH2Q6PI25 160 aa11.23□□□□□ -0.61
HDAC4-205ENST00000454542 HOGA1Q86XE5 327 aa11.23□□□□□ -0.61
HDAC4-205ENST00000454542 RAB2BQ8WUD1 216 aa11.23□□□□□ -0.61
HDAC4-205ENST00000454542 ANXA10Q9UJ72 324 aa11.23□□□□□ -0.61
HDAC4-205ENST00000454542 TET2Q6N021 2002 aaPredicted RBP11.23□□□□□ -0.61
HDAC4-205ENST00000454542 TUSC2O75896 110 aa11.22□□□□□ -0.61
HDAC4-205ENST00000454542 NDUFA3O95167 84 aa11.22□□□□□ -0.61
HDAC4-205ENST00000454542 CTXN2P0C2S0 81 aa11.22□□□□□ -0.61
HDAC4-205ENST00000454542 PTHLHP12272 177 aa11.22□□□□□ -0.61
HDAC4-205ENST00000454542 RORCP51449 518 aa11.22□□□□□ -0.61
HDAC4-205ENST00000454542 FAM131AQ6UXB0 335 aa11.22□□□□□ -0.61
HDAC4-205ENST00000454542 SNAPC3Q92966 411 aa11.22□□□□□ -0.61
HDAC4-205ENST00000454542 RBMXL1Q96E39 390 aaKnown RBP11.22□□□□□ -0.61
HDAC4-205ENST00000454542 S100A16Q96FQ6 103 aaKnown RBP11.22□□□□□ -0.61
HDAC4-205ENST00000454542 OR2D2Q9H210 308 aa11.22□□□□□ -0.61
HDAC4-205ENST00000454542 ZNF580Q9UK33 172 aa11.22□□□□□ -0.61
HDAC4-205ENST00000454542 VSIG10L2P0DP72 767 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 ZNF182P17025 639 aaPredicted RBP11.21□□□□□ -0.61
HDAC4-205ENST00000454542 CBX5P45973 191 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 GPR12P47775 334 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 TMBIM6P55061 237 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms