RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 STEAP1BQ6NZ63 245 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 IL17RELQ6ZVW7 336 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 Q71RC1 249 aaPredicted RBP9.39□□□□□ -0.91
SCN9A-204ENST00000452182 OR10X1Q8NGY0 326 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 MALSU1Q96EH3 234 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 AJUBAQ96IF1 538 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 MS4A7Q9GZW8 240 aaPredicted RBP9.39□□□□□ -0.91
SCN9A-204ENST00000452182 IFI27L2Q9H2X8 130 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 DPM3Q9P2X0 92 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 GAB2Q9UQC2 676 aa9.39□□□□□ -0.91
SCN9A-204ENST00000452182 A0A1W2PPE3 182 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 OOSP1A8MZH6 123 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 CRLF1O75462 422 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 AKAIN1P0CW23 69 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 IL7P13232 177 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 EPHA1P21709 976 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 NFYAP23511 347 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-204ENST00000452182 IL3RAP26951 378 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 FCGR2CP31995 323 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 KLF9Q13886 244 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-204ENST00000452182 LDLRAD2Q5SZI1 272 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 TRIQKQ629K1 86 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 TOMM5Q8N4H5 51 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 OR6F1Q8NGZ6 308 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 ST6GALNAC6Q969X2 333 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 TINAGL1Q9GZM7 467 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-204ENST00000452182 PARP12Q9H0J9 701 aaKnown RBP9.38□□□□□ -0.91
SCN9A-204ENST00000452182 PRDM13Q9H4Q3 707 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 PIPOXQ9P0Z9 390 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 NAV3Q8IVL0 2385 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 A0A1W2PRD5 423 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 A0A1W2PRF3 423 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 A0A1W2PRM7 423 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 M0QYG6 137 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 RAB29O14966 203 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 ST8SIA5O15466 376 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 RAB3DO95716 219 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 PPYP01298 95 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 IFNA6P05013 189 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 SRD5A1P18405 259 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 TSPAN5P62079 268 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 SAMD5Q5TGI4 173 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 FAM71F2Q6NXP2 309 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 LHFPL4Q7Z7J7 247 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 TMEM17Q86X19 198 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 ODF3L1Q8IXM7 274 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 LYG1Q8N1E2 194 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.38□□□□□ -0.91
SCN9A-204ENST00000452182 MEGF9Q9H1U4 602 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 ZNRD1Q9P1U0 126 aa9.38□□□□□ -0.91
SCN9A-204ENST00000452182 ZFHX3Q15911 3703 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 SONP18583 2426 aaKnown RBP9.37□□□□□ -0.91
SCN9A-204ENST00000452182 A0A0U1RQK1 487 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 TXNL1O43396 289 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 SLC22A5O76082 557 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 FBP1P09467 338 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 OR8U9P0C7N5 309 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 AADACP22760 399 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 FAUP35544 74 aaKnown RBP9.37□□□□□ -0.91
SCN9A-204ENST00000452182 LUMP51884 338 aaPredicted RBP9.37□□□□□ -0.91
SCN9A-204ENST00000452182 ZNF816Q0VGE8 651 aaPredicted RBP9.37□□□□□ -0.91
SCN9A-204ENST00000452182 MSMO1Q15800 293 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 TPTE2P1Q5T6R2 138 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 LHFPL1Q86WI0 220 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 LDLRAD3Q86YD5 345 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 OR4D10Q8NGI6 311 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 OR4C16Q8NGL9 310 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 OR8U1Q8NH10 309 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 MOB3AQ96BX8 217 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 ZNF2Q9BSG1 426 aaPredicted RBP9.37□□□□□ -0.91
SCN9A-204ENST00000452182 SLC2A8Q9NY64 477 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 FAM96BQ9Y3D0 163 aa9.37□□□□□ -0.91
SCN9A-204ENST00000452182 SAA2-SAA4A0A096LPE2 208 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 GAPDHP04406 335 aaKnown RBP9.36□□□□□ -0.91
SCN9A-204ENST00000452182 AMY2AP04746 511 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 ZNF735P0CB33 412 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 FAM157CP0CG43 387 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 SAA2P0DJI9 122 aaPredicted RBP9.36□□□□□ -0.91
SCN9A-204ENST00000452182 INPP1P49441 399 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 AANATQ16613 207 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 CCDC144NLQ6NUI1 221 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 ZNF833PQ6ZTB9 187 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 BCL6BQ8N143 479 aaPredicted RBP9.36□□□□□ -0.91
SCN9A-204ENST00000452182 ZNF645Q8N7E2 425 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 C17orf50Q8WW18 174 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 RPEQ96AT9 228 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 ABHD14BQ96IU4 210 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 S1PR3Q99500 378 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 TSC22D3Q99576 134 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 SLC6A7Q99884 636 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 PRRT1Q99946 306 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 ZNF251Q9BRH9 671 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 OR2D2Q9H210 308 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 ZNF221Q9UK13 617 aa9.36□□□□□ -0.91
SCN9A-204ENST00000452182 RBM7Q9Y580 266 aaKnown RBP9.36□□□□□ -0.91
SCN9A-204ENST00000452182 IGKV1D-13A0A0B4J2D9 117 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 VGLL3A8MV65 326 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 DISC1C4P0D8 188 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 J3QRK9 145 aa9.35□□□□□ -0.91
SCN9A-204ENST00000452182 HSD17B6O14756 317 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms