RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 OR10A7Q8NGE5 316 aa11.77□□□□□ -0.52
USP39-207ENST00000450066 OR52M1Q8NGK5 317 aa11.77□□□□□ -0.52
USP39-207ENST00000450066 PLEKHF2Q9H8W4 249 aa11.77□□□□□ -0.52
USP39-207ENST00000450066 IDI2-AS1Q9NZ38 188 aa11.77□□□□□ -0.52
USP39-207ENST00000450066 ST8SIA5O15466 376 aa11.77□□□□□ -0.53
USP39-207ENST00000450066 PET100P0DJ07 73 aa11.77□□□□□ -0.53
USP39-207ENST00000450066 C5orf30Q96GV9 206 aa11.77□□□□□ -0.53
USP39-207ENST00000450066 MFFQ9GZY8 342 aa11.77□□□□□ -0.53
USP39-207ENST00000450066 MBD2Q9UBB5 411 aa11.77□□□□□ -0.53
USP39-207ENST00000450066 TNFSF18Q9UNG2 199 aa11.77□□□□□ -0.53
USP39-207ENST00000450066 LY6HO94772 140 aa11.76□□□□□ -0.53
USP39-207ENST00000450066 RNF224P0DH78 156 aa11.76□□□□□ -0.53
USP39-207ENST00000450066 VDAC1P21796 283 aa11.76□□□□□ -0.53
USP39-207ENST00000450066 ESCO2Q56NI9 601 aa11.76□□□□□ -0.53
USP39-207ENST00000450066 TMEM200BQ69YZ2 307 aa11.76□□□□□ -0.53
USP39-207ENST00000450066 H1FXQ92522 213 aaKnown RBP11.76□□□□□ -0.53
USP39-207ENST00000450066 ABHD14BQ96IU4 210 aa11.76□□□□□ -0.53
USP39-207ENST00000450066 RNF126Q9BV68 326 aa11.76□□□□□ -0.53
USP39-207ENST00000450066 SDHAF2Q9NX18 166 aa11.76□□□□□ -0.53
USP39-207ENST00000450066 SPTAN1Q13813 2472 aaKnown RBP11.76□□□□□ -0.53
USP39-207ENST00000450066 LYL1P12980 280 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 GPR12P47775 334 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 RAB7AP51149 207 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 ZNF134P52741 427 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 RAB32Q13637 225 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 ZNF273Q14593 569 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 PRSS54Q6PEW0 395 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 ZNF66Q6ZN08 573 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 RAB1CQ92928 201 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 TIMD4Q96H15 378 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 ZNF714Q96N38 554 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 SPOCK3Q9BQ16 436 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 RPUSD1Q9UJJ7 312 aaKnown RBP11.75□□□□□ -0.53
USP39-207ENST00000450066 PAIP2BQ9ULR5 123 aaKnown RBP11.75□□□□□ -0.53
USP39-207ENST00000450066 H0YIZ8 118 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 TSC22D2O75157 780 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 ZNF16P17020 682 aaPredicted RBP11.75□□□□□ -0.53
USP39-207ENST00000450066 S100A11P31949 105 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 CATR1Q13166 79 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 ZNF345Q14585 488 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 NMSQ5H8A3 153 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 HEPN1Q6WQI6 88 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 TMUB2Q71RG4 321 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 TCTEX1D1Q8N7M0 179 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 HSD17B10Q99714 261 aaKnown RBP11.75□□□□□ -0.53
USP39-207ENST00000450066 SPIN2AQ99865 258 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 SPIN2BQ9BPZ2 258 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 ABHD14AQ9BUJ0 271 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 IFI27L2Q9H2X8 130 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 HEXA-AS1Q9H8Q6 139 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 CHODLQ9H9P2 273 aa11.75□□□□□ -0.53
USP39-207ENST00000450066 FAM212BQ9NTI7 297 aaPredicted RBP11.75□□□□□ -0.53
USP39-207ENST00000450066 TRBV23-1A0A0A0MS06 115 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 CLEC18AA5D8T8 446 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 GPR37O15354 613 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 OR2F2O95006 317 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 NFYBP25208 207 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 TMEM33P57088 247 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 OR2F1Q13607 317 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 OPCMLQ14982 345 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 Q3ZCU0 254 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 TMEM155Q4W5P6 130 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 ZNF585BQ52M93 769 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 CT45A1Q5HYN5 189 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 AVPI1Q5T686 147 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 PRAMEF5Q5TYX0 476 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 ZNF841Q6ZN19 808 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 ACOT7LQ6ZUV0 252 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 INO80EQ8NBZ0 244 aaPredicted RBP11.74□□□□□ -0.53
USP39-207ENST00000450066 CLEC18CQ8NCF0 446 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 CT45A3Q8NHU0 189 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 ZFP57Q9NU63 452 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 RALYQ9UKM9 306 aaKnown RBP11.74□□□□□ -0.53
USP39-207ENST00000450066 GAB2Q9UQC2 676 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 A0A0D9SG52 128 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 PPIHO43447 177 aaKnown RBP11.74□□□□□ -0.53
USP39-207ENST00000450066 MMP23AO75900 390 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 CLDN1O95832 211 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 F12P00748 615 aaPredicted RBP11.74□□□□□ -0.53
USP39-207ENST00000450066 CDKN1AP38936 164 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 S100A10P60903 97 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 RPL30P62888 115 aaKnown RBP11.74□□□□□ -0.53
USP39-207ENST00000450066 UTF1Q5T230 341 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 BTNL3Q6UXE8 466 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 ZNF439Q8NDP4 499 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 DCUN1D4Q92564 292 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 ARL6Q9H0F7 186 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 OR5AC2Q9NZP5 309 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 MIOXQ9UGB7 285 aa11.74□□□□□ -0.53
USP39-207ENST00000450066 RNF222A6NCQ9 220 aa11.73□□□□□ -0.53
USP39-207ENST00000450066 PROP1O75360 226 aa11.73□□□□□ -0.53
USP39-207ENST00000450066 IGKV1-39P01597 117 aa11.73□□□□□ -0.53
USP39-207ENST00000450066 IGHV3-7P01780 117 aa11.73□□□□□ -0.53
USP39-207ENST00000450066 MBPP02686 304 aaPredicted RBP11.73□□□□□ -0.53
USP39-207ENST00000450066 IGKV1D-39P04432 117 aa11.73□□□□□ -0.53
USP39-207ENST00000450066 KCNRGQ8N5I3 272 aa11.73□□□□□ -0.53
USP39-207ENST00000450066 OR4D5Q8NGN0 318 aa11.73□□□□□ -0.53
USP39-207ENST00000450066 TCTEX1D2Q8WW35 142 aa11.73□□□□□ -0.53
USP39-207ENST00000450066 LEAP2Q969E1 77 aa11.73□□□□□ -0.53
USP39-207ENST00000450066 LSM10Q969L4 123 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms