RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 MFAP4P55083 255 aa2.54□□□□□ -2
CHD9-203ENST00000447540 LINC01545Q5VT33 79 aa2.54□□□□□ -2
CHD9-203ENST00000447540 THSD4Q6ZMP0 1018 aa2.54□□□□□ -2
CHD9-203ENST00000447540 FOXI2Q6ZQN5 318 aa2.54□□□□□ -2
CHD9-203ENST00000447540 PIANPQ8IYJ0 282 aa2.54□□□□□ -2
CHD9-203ENST00000447540 ZNF611Q8N823 705 aa2.54□□□□□ -2
CHD9-203ENST00000447540 SLC35A4Q96G79 324 aa2.54□□□□□ -2
CHD9-203ENST00000447540 NKX3-1Q99801 234 aaPredicted RBP2.54□□□□□ -2
CHD9-203ENST00000447540 RNF39Q9H2S5 420 aa2.54□□□□□ -2
CHD9-203ENST00000447540 TMEM160Q9NX00 188 aa2.54□□□□□ -2
CHD9-203ENST00000447540 WRAP73Q9P2S5 460 aaPredicted RBP2.54□□□□□ -2
CHD9-203ENST00000447540 CNOT1A5YKK6 2376 aaKnown RBP2.54□□□□□ -2
CHD9-203ENST00000447540 EXPH5Q8NEV8 1989 aa2.54□□□□□ -2
CHD9-203ENST00000447540 HMGN4O00479 90 aa2.54□□□□□ -2
CHD9-203ENST00000447540 GRM6O15303 877 aa2.54□□□□□ -2
CHD9-203ENST00000447540 WIPF1O43516 503 aa2.54□□□□□ -2
CHD9-203ENST00000447540 MRPL3P09001 348 aaKnown RBP2.54□□□□□ -2
CHD9-203ENST00000447540 SPINK8P0C7L1 97 aa2.54□□□□□ -2
CHD9-203ENST00000447540 MLF1P58340 268 aa2.54□□□□□ -2
CHD9-203ENST00000447540 CLRN1P58418 232 aa2.54□□□□□ -2
CHD9-203ENST00000447540 ANKRD55Q3KP44 614 aa2.54□□□□□ -2
CHD9-203ENST00000447540 ZNF880Q6PDB4 577 aa2.54□□□□□ -2
CHD9-203ENST00000447540 UNQ5815/PRO19632Q6UWF5 114 aa2.54□□□□□ -2
CHD9-203ENST00000447540 SYT9Q86SS6 491 aa2.54□□□□□ -2
CHD9-203ENST00000447540 OR8B3Q8NGG8 313 aa2.54□□□□□ -2
CHD9-203ENST00000447540 VGLL1Q99990 258 aa2.54□□□□□ -2
CHD9-203ENST00000447540 ZNF443Q9Y2A4 671 aaPredicted RBP2.54□□□□□ -2
CHD9-203ENST00000447540 HS3ST3B1Q9Y662 390 aa2.54□□□□□ -2
CHD9-203ENST00000447540 LTBP3Q9NS15 1303 aa2.54□□□□□ -2
CHD9-203ENST00000447540 GREB1LQ9C091 1923 aaPredicted RBP2.54□□□□□ -2
CHD9-203ENST00000447540 PTPRQQ9UMZ3 2332 aa2.54□□□□□ -2
CHD9-203ENST00000447540 ODAMA1E959 279 aa2.54□□□□□ -2
CHD9-203ENST00000447540 NEURL1O76050 574 aa2.54□□□□□ -2
CHD9-203ENST00000447540 SELEP16581 610 aa2.54□□□□□ -2
CHD9-203ENST00000447540 CTXN1P60606 82 aa2.54□□□□□ -2
CHD9-203ENST00000447540 RPL23P62829 140 aaKnown RBP2.54□□□□□ -2
CHD9-203ENST00000447540 EML5Q05BV3 1969 aa2.54□□□□□ -2
CHD9-203ENST00000447540 SRSF1Q07955 248 aaKnown RBP eCLIP2.54□□□□□ -28e-9■□□□□ 8.9
CHD9-203ENST00000447540 ZP4Q12836 540 aa2.54□□□□□ -2
CHD9-203ENST00000447540 MALLQ13021 153 aa2.54□□□□□ -2
CHD9-203ENST00000447540 ZNF260Q3ZCT1 412 aa2.54□□□□□ -2
CHD9-203ENST00000447540 ASTLQ6HA08 431 aaPredicted RBP2.54□□□□□ -2
CHD9-203ENST00000447540 FAM166AQ6J272 317 aa2.54□□□□□ -2
CHD9-203ENST00000447540 KCPQ6ZWJ8 1503 aa2.54□□□□□ -2
CHD9-203ENST00000447540 ISG20L2Q9H9L3 353 aaKnown RBP2.54□□□□□ -2
CHD9-203ENST00000447540 ENY2Q9NPA8 101 aa2.54□□□□□ -2
CHD9-203ENST00000447540 FAM231BA6NCW3 169 aa2.54□□□□□ -2
CHD9-203ENST00000447540 OR4C46A6NHA9 309 aa2.54□□□□□ -2
CHD9-203ENST00000447540 NDUFS4O43181 175 aa2.54□□□□□ -2
CHD9-203ENST00000447540 CNIH1O95406 144 aa2.54□□□□□ -2
CHD9-203ENST00000447540 AMY1AP04745 511 aa2.54□□□□□ -2
CHD9-203ENST00000447540 EDDM3AQ14507 147 aa2.54□□□□□ -2
CHD9-203ENST00000447540 ELAVL3Q14576 367 aaKnown RBP2.54□□□□□ -2
CHD9-203ENST00000447540 DCAF12Q5T6F0 453 aa2.54□□□□□ -2
CHD9-203ENST00000447540 GFI1BQ5VTD9 330 aa2.54□□□□□ -2
CHD9-203ENST00000447540 LHFPL1Q86WI0 220 aa2.54□□□□□ -2
CHD9-203ENST00000447540 OR52N5Q8NH56 324 aa2.54□□□□□ -2
CHD9-203ENST00000447540 LTBP4Q8N2S1 1624 aa2.54□□□□□ -2
CHD9-203ENST00000447540 PCDH15Q96QU1 1955 aa2.54□□□□□ -2
CHD9-203ENST00000447540 IGLV3-16A0A075B6K0 115 aa2.54□□□□□ -2
CHD9-203ENST00000447540 SHISA3A0PJX4 238 aa2.54□□□□□ -2
CHD9-203ENST00000447540 B4DGG1 531 aa2.54□□□□□ -2
CHD9-203ENST00000447540 RAB29O14966 203 aa2.54□□□□□ -2
CHD9-203ENST00000447540 IRF1P10914 325 aa2.54□□□□□ -2
CHD9-203ENST00000447540 OR10G6Q8NH81 332 aa2.54□□□□□ -2
CHD9-203ENST00000447540 TMEM101Q96IK0 257 aa2.54□□□□□ -2
CHD9-203ENST00000447540 SPATA25Q9BR10 227 aa2.54□□□□□ -2
CHD9-203ENST00000447540 DECR2Q9NUI1 292 aa2.54□□□□□ -2
CHD9-203ENST00000447540 RNF115Q9Y4L5 304 aa2.54□□□□□ -2
CHD9-203ENST00000447540 IGHV1-24A0A0C4DH33 117 aa2.54□□□□□ -2
CHD9-203ENST00000447540 A0A1B0GWB2 263 aa2.54□□□□□ -2
CHD9-203ENST00000447540 B4GALT3O60512 393 aa2.54□□□□□ -2
CHD9-203ENST00000447540 IL15RAQ13261 267 aa2.54□□□□□ -2
CHD9-203ENST00000447540 LY6DQ14210 128 aa2.54□□□□□ -2
CHD9-203ENST00000447540 LCN15Q6UWW0 184 aa2.54□□□□□ -2
CHD9-203ENST00000447540 WDR82Q6UXN9 313 aa2.54□□□□□ -2
CHD9-203ENST00000447540 CA13Q8N1Q1 262 aa2.54□□□□□ -2
CHD9-203ENST00000447540 Q8NFD4 153 aa2.54□□□□□ -2
CHD9-203ENST00000447540 AP5S1Q9NUS5 200 aa2.54□□□□□ -2
CHD9-203ENST00000447540 HELZP42694 1942 aaKnown RBP2.54□□□□□ -2
CHD9-203ENST00000447540 ARHGAP21Q5T5U3 1957 aa2.53□□□□□ -2
CHD9-203ENST00000447540 ZIC2O95409 532 aaPredicted RBP2.53□□□□□ -2
CHD9-203ENST00000447540 BLVRBP30043 206 aaPredicted RBP2.53□□□□□ -2
CHD9-203ENST00000447540 CDCP2Q5VXM1 449 aa2.53□□□□□ -2
CHD9-203ENST00000447540 NEGR1Q7Z3B1 354 aa2.53□□□□□ -2
CHD9-203ENST00000447540 CLDN19Q8N6F1 224 aa2.53□□□□□ -2
CHD9-203ENST00000447540 NPFFR1Q9GZQ6 430 aa2.53□□□□□ -2
CHD9-203ENST00000447540 ZNF256Q9Y2P7 627 aaPredicted RBP2.53□□□□□ -2
CHD9-203ENST00000447540 TNFRSF18Q9Y5U5 241 aa2.53□□□□□ -2
CHD9-203ENST00000447540 PCNX1Q96RV3 2341 aa2.53□□□□□ -2
CHD9-203ENST00000447540 A0A1B0GX51 115 aa2.53□□□□□ -2
CHD9-203ENST00000447540 SOX1O00570 391 aaPredicted RBP2.53□□□□□ -2
CHD9-203ENST00000447540 APCSP02743 223 aa2.53□□□□□ -2
CHD9-203ENST00000447540 PGFP49763 221 aa2.53□□□□□ -2
CHD9-203ENST00000447540 UCNP55089 124 aa2.53□□□□□ -2
CHD9-203ENST00000447540 TIAL1Q01085 375 aaKnown RBP eCLIP2.53□□□□□ -23e-8■■■■■ 28.9
CHD9-203ENST00000447540 TAAR3PQ9P1P4 343 aa2.53□□□□□ -2
CHD9-203ENST00000447540 HIGD1BQ9P298 99 aa2.53□□□□□ -2
CHD9-203ENST00000447540 UBE2L5PA0A1B0GUS4 154 aa2.53□□□□□ -2
CHD9-203ENST00000447540 OR4A8P0C604 315 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms