RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 STEAP1Q9UHE8 339 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 LRRC42Q9Y546 428 aa14.17□□□□□ -0.14
COL9A1-205ENST00000447041 TRAV41A0A0B4J266 112 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 BPNT1O95861 308 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 IGLV1-40P01703 118 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 CD37P11049 281 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 AQP4P55087 323 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 P2RY14Q15391 338 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 GLDNQ6ZMI3 551 aaPredicted RBP14.16□□□□□ -0.14
COL9A1-205ENST00000447041 ZNF491Q8N8L2 437 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 OR6M1Q8NGM8 313 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 UFD1Q92890 307 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 UBE2E2Q96LR5 201 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 CHCHD6Q9BRQ6 235 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 PLEKHJ1Q9NW61 149 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 SCN3BQ9NY72 215 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 PIPOXQ9P0Z9 390 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 KIAA1456Q9P272 454 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 NKX1-2Q9UD57 310 aaPredicted RBP14.16□□□□□ -0.14
COL9A1-205ENST00000447041 AK3Q9UIJ7 227 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 SCOCQ9UIL1 159 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 FBXO7Q9Y3I1 522 aa14.16□□□□□ -0.14
COL9A1-205ENST00000447041 I3L521 148 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 RAB29O14966 203 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 SOCS1O15524 211 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 CT45A6P0DMU7 189 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 CT45A5P0DMU8 189 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 CT45A7P0DMV0 189 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 ECI1P42126 302 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 RPS25P62851 125 aaKnown RBP14.15□□□□□ -0.14
COL9A1-205ENST00000447041 GNB1P62873 340 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 ECSCRQ19T08 205 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 ZNF260Q3ZCT1 412 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 LIN54Q6MZP7 749 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 TMEM65Q6PI78 240 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 TMEM91Q6ZNR0 172 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 MOB1BQ7L9L4 216 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 ABHD14BQ96IU4 210 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 FBXL15Q9H469 300 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 OR1A1Q9P1Q5 309 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 SLC23A1Q9UHI7 598 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 VSIG4Q9Y279 399 aa14.15□□□□□ -0.14
COL9A1-205ENST00000447041 LSM4Q9Y4Z0 139 aaKnown RBP14.15□□□□□ -0.14
COL9A1-205ENST00000447041 HLA-DRB3P79483 266 aa14.14□□□□□ -0.15
COL9A1-205ENST00000447041 PLGRKTQ9HBL7 147 aa14.14□□□□□ -0.15
COL9A1-205ENST00000447041 AK6Q9Y3D8 172 aaKnown RBP14.14□□□□□ -0.15
COL9A1-205ENST00000447041 TRBV6-6A0A0A6YYG2 114 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 FOXI3A8MTJ6 420 aaPredicted RBP14.13□□□□□ -0.15
COL9A1-205ENST00000447041 H0YJW9 148 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 SLC17A2O00624 439 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 SOX15O60248 233 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 OR8U8P0C7N1 319 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 HSMCR30P0CW71 290 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 ARSBP15848 533 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 RAB9AP51151 201 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 RUNX1Q01196 453 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 ZNF616Q08AN1 781 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 C19orf54Q5BKX5 351 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 MINDY2Q8NBR6 621 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 OR1N2Q8NGR9 330 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 CASTOR1Q8WTX7 329 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 NRG4Q8WWG1 115 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 AGMATQ9BSE5 352 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 URM1Q9BTM9 101 aaKnown RBP14.13□□□□□ -0.15
COL9A1-205ENST00000447041 ALX4Q9H161 411 aaPredicted RBP14.13□□□□□ -0.15
COL9A1-205ENST00000447041 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.13□□□□□ -0.15
COL9A1-205ENST00000447041 A3GALT2U3KPV4 340 aa14.13□□□□□ -0.15
COL9A1-205ENST00000447041 A0A1W2PN81 502 aa14.12□□□□□ -0.15
COL9A1-205ENST00000447041 OR5H14A6NHG9 310 aa14.12□□□□□ -0.15
COL9A1-205ENST00000447041 RRHO14718 337 aa14.12□□□□□ -0.15
COL9A1-205ENST00000447041 SNRPBP14678 240 aaKnown RBP14.12□□□□□ -0.15
COL9A1-205ENST00000447041 CHRNA7P36544 502 aa14.12□□□□□ -0.15
COL9A1-205ENST00000447041 CLDN12P56749 244 aa14.12□□□□□ -0.15
COL9A1-205ENST00000447041 PLGLAQ15195 96 aa14.12□□□□□ -0.15
COL9A1-205ENST00000447041 FAM89BQ8N5H3 189 aa14.12□□□□□ -0.15
COL9A1-205ENST00000447041 WWC2-AS2Q96NR7 200 aa14.12□□□□□ -0.15
COL9A1-205ENST00000447041 RIMS4Q9H426 269 aaPredicted RBP14.12□□□□□ -0.15
COL9A1-205ENST00000447041 H7C2Y5 167 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 FCN1O00602 326 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 ITGB1BP1O14713 200 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 SCTP09683 121 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 CEACAM6P40199 344 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 VEGFCP49767 419 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 CRIP2P52943 208 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-205ENST00000447041 TMEM50BP56557 158 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 CX3CL1P78423 397 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 TPBGQ13641 420 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 RAB11BQ15907 218 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 DRAXINQ8NBI3 349 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-205ENST00000447041 ARHGAP5-AS1Q96IT6 56 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 C11orf54Q9H0W9 315 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-205ENST00000447041 DUSP21Q9H596 190 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 Q9N2K0 584 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 C12orf4Q9NQ89 552 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 HSF4Q9ULV5 492 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 GAB2Q9UQC2 676 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 ZNF256Q9Y2P7 627 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-205ENST00000447041 WASHC3Q9Y3C0 194 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 TPRKBQ9Y3C4 175 aa14.11□□□□□ -0.15
COL9A1-205ENST00000447041 RYR3Q15413 4870 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms