RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 RNF150Q9ULK6 438 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 ETV7Q9Y603 341 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 WNK1Q9H4A3 2382 aa11.77□□□□□ -0.52
HDAC4-204ENST00000446876 NCBP2LA6PVI3 153 aaKnown RBP11.77□□□□□ -0.53
HDAC4-204ENST00000446876 M0QZ24 198 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 M0QZK8 103 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 BET1O15155 118 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 MOSP00540 346 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 TALDO1P37837 337 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 SERPINB10P48595 397 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 VBP1P61758 197 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 C10orf99Q6UWK7 81 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 TREML4Q6UXN2 200 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 GLDNQ6ZMI3 551 aaPredicted RBP11.77□□□□□ -0.53
HDAC4-204ENST00000446876 OR4A4PQ8NGN8 299 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 ZNF251Q9BRH9 671 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 AGMATQ9BSE5 352 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 CABLES2Q9BTV7 478 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 NAA50Q9GZZ1 169 aaKnown RBP11.77□□□□□ -0.53
HDAC4-204ENST00000446876 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.77□□□□□ -0.53
HDAC4-204ENST00000446876 RDH8Q9NYR8 311 aa11.77□□□□□ -0.53
HDAC4-204ENST00000446876 FGF16O43320 207 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 SSX5O60225 188 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 FBXO24O75426 580 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 F2RL1P55085 397 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 KIR2DS1Q14954 304 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 ZNF260Q3ZCT1 412 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 HACD4Q5VWC8 232 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 Q8N9W7 124 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 EDARADDQ8WWZ3 215 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 RITA1Q96K30 269 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 PLSCR3Q9NRY6 295 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 PIPOXQ9P0Z9 390 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 NBEAL1Q6ZS30 2694 aa11.76□□□□□ -0.53
HDAC4-204ENST00000446876 TRAV18A0A075B6X5 111 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 LINC01548A6NM66 108 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 ITGB1BP1O14713 200 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 RAB29O14966 203 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 GSTP1P09211 210 aaKnown RBP11.75□□□□□ -0.53
HDAC4-204ENST00000446876 PTHLHP12272 177 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 CNTFRP26992 372 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 SCAND1P57086 179 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 GNG2P59768 71 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 FAM131AQ6UXB0 335 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 NOL4LQ96MY1 436 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-204ENST00000446876 S1PR3Q99500 378 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 CITED2Q99967 270 aaPredicted RBP11.75□□□□□ -0.53
HDAC4-204ENST00000446876 ST6GALNAC5Q9BVH7 336 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 MRPS26Q9BYN8 205 aaKnown RBP11.75□□□□□ -0.53
HDAC4-204ENST00000446876 LINC00527Q9UJ94 153 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 SPATA2Q9UM82 520 aa11.75□□□□□ -0.53
HDAC4-204ENST00000446876 TRBV6-7A0A0A0MS04 114 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 PROP1O75360 226 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 SCGNO76038 276 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 CT45A6P0DMU7 189 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 CT45A5P0DMU8 189 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 CT45A7P0DMV0 189 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 DTYMKP23919 212 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 LINC00205P59089 165 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 ARL6IP1Q15041 203 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 C2orf68Q2NKX9 166 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 NSUN5P1Q3KNT7 163 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 FAM71F2Q6NXP2 309 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 CENPVQ7Z7K6 275 aaPredicted RBP11.74□□□□□ -0.53
HDAC4-204ENST00000446876 DRAXINQ8NBI3 349 aaPredicted RBP11.74□□□□□ -0.53
HDAC4-204ENST00000446876 OR5AU1Q8NGC0 362 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 OR10J5Q8NHC4 309 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 FAM110DQ8TAY7 271 aaPredicted RBP11.74□□□□□ -0.53
HDAC4-204ENST00000446876 PHF21AQ96BD5 680 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 PKD1L1Q8TDX9 2849 aa11.74□□□□□ -0.53
HDAC4-204ENST00000446876 FCER2P06734 321 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 CSF1P09603 554 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 OR8U9P0C7N5 309 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 GPR12P47775 334 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 ACTBP60709 375 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 MMDQ15546 238 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 PNLIPRP3Q17RR3 467 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 MGAM2Q2M2H8 2515 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 TCTEX1D4Q5JR98 221 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 GPR107Q5VW38 600 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 Q6ZS49 121 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 SLC35E3Q7Z769 313 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 CROCCP3Q8IVE0 287 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 FAM71E2Q8N5Q1 922 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 SAMD12Q8N8I0 201 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 OR8U1Q8NH10 309 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 SLC25A46Q96AG3 418 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 C5orf30Q96GV9 206 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 HSPB9Q9BQS6 159 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 GINS4Q9BRT9 223 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 TOLLIPQ9H0E2 274 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 OR2D2Q9H210 308 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 LIN7CQ9NUP9 197 aaKnown RBP11.73□□□□□ -0.53
HDAC4-204ENST00000446876 ZNF221Q9UK13 617 aa11.73□□□□□ -0.53
HDAC4-204ENST00000446876 A0A1W2PRX2 142 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 ADARB2-AS1A8MUL3 147 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 H0YJW9 148 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 J3QRK9 145 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 GABARAPO95166 117 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 IGHG2P01859 326 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms