RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 UMODP07911 640 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 S100GP29377 79 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 CHRNB4P30926 498 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 ATP5G3P48201 142 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 RNPS1Q15287 305 aaKnown RBP11.85□□□□□ -0.51
VPS52-212ENST00000445902 TMEM183BQ1AE95 376 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 ZIC4Q8N9L1 334 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 REPIN1Q9BWE0 567 aaKnown RBP11.85□□□□□ -0.51
VPS52-212ENST00000445902 RYDENQ9NUL5 291 aaKnown RBP11.85□□□□□ -0.51
VPS52-212ENST00000445902 CD207Q9UJ71 328 aa11.85□□□□□ -0.51
VPS52-212ENST00000445902 IGHV1OR21-1A0A087WYE8 117 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 YPEL1O60688 119 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 NDUFB4O95168 129 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 LINC00310P59036 64 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 MRPS21P82921 87 aaKnown RBP11.84□□□□□ -0.51
VPS52-212ENST00000445902 FOXL2NBQ6ZUU3 175 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 Q6ZVH6 145 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 YPEL2Q96QA6 119 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 ASCL3Q9NQ33 180 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 TMEM9BQ9NQ34 198 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 RNF114Q9Y508 228 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 ATP23Q9Y6H3 246 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 KIR2DS1A0A191URI9 304 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 IGHV3-9P01782 118 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 CELA2AP08217 269 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 CCL2P13500 99 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 KIR2DS4P43632 304 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 THBS3P49746 956 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 KIR2DS1Q14954 304 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 SPINK9Q5DT21 86 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 CLDN23Q96B33 292 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 C20orf144Q9BQM9 153 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 OR51B6Q9H340 312 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 OR2W1Q9Y3N9 320 aa11.84□□□□□ -0.51
VPS52-212ENST00000445902 WDR1O75083 606 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 GNB1P62873 340 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 LCN2P80188 198 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 ANKRD39Q53RE8 183 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 TEX43Q6ZNM6 134 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 ZNF709Q8N972 641 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 RNASE8Q8TDE3 154 aaKnown RBP11.83□□□□□ -0.52
VPS52-212ENST00000445902 HLA-CQ95604 372 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 FGF23Q9GZV9 251 aaPredicted RBP11.83□□□□□ -0.52
VPS52-212ENST00000445902 FAM186AA6NE01 2351 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 LOC102725191A0A1B0GVB3 256 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 RBFOX2O43251 390 aaKnown RBP eCLIP11.83□□□□□ -0.52
VPS52-212ENST00000445902 CRYABP02511 175 aaKnown RBP11.83□□□□□ -0.52
VPS52-212ENST00000445902 WNT2P09544 360 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 CCR5P51681 352 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 TPPP2P59282 170 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 GCSAMLQ5JQS6 135 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 SLC23A3Q6PIS1 610 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 SPACA9Q96E40 222 aaPredicted RBP11.83□□□□□ -0.52
VPS52-212ENST00000445902 SAMD10Q9BYL1 202 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 SRXN1Q9BYN0 137 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 CLN8Q9UBY8 286 aa11.83□□□□□ -0.52
VPS52-212ENST00000445902 TRAV34A0A0B4J273 112 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 FRMD6-AS1P0C7T7 363 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 SOX8P57073 446 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 KRTDAPP60985 99 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 RPP30P78346 268 aaKnown RBP11.82□□□□□ -0.52
VPS52-212ENST00000445902 IGFBP7Q16270 282 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 ZNF324BQ6AW86 544 aaPredicted RBP11.82□□□□□ -0.52
VPS52-212ENST00000445902 NUFIP2Q7Z417 695 aaKnown RBP11.82□□□□□ -0.52
VPS52-212ENST00000445902 TMEM144Q7Z5S9 345 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 OR56B2PQ8NGI1 322 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 CIB3Q96Q77 187 aaPredicted RBP11.82□□□□□ -0.52
VPS52-212ENST00000445902 ELOVL5Q9NYP7 299 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 MTCH1Q9NZJ7 389 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 MMP17Q9ULZ9 603 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 ZFAND5O76080 213 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 COL5A1-AS1Q5SY13 56 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 RNF138Q8WVD3 245 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 DEFB126Q9BYW3 111 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 CHRNA10Q9GZZ6 450 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 COL6A3P12111 3177 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 IGLV3-32A0A0A0MS00 114 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 A0A0J9YW62 118 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 SYNGR1O43759 233 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 ACSF3Q4G176 576 aaPredicted RBP11.82□□□□□ -0.52
VPS52-212ENST00000445902 BAGE3Q86Y29 109 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 BAGE2Q86Y30 109 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 OR1L1Q8NH94 360 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 WNT5BQ9H1J7 359 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 UBE2ZQ9H832 354 aaPredicted RBP11.82□□□□□ -0.52
VPS52-212ENST00000445902 TUBG2Q9NRH3 451 aa11.82□□□□□ -0.52
VPS52-212ENST00000445902 GTF3C1Q12789 2109 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 OR6C6A6NF89 314 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 AQP7O14520 342 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 MLNRO43193 412 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 VENTXO95231 258 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 ZNF585BQ52M93 769 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 C9orf135Q5VTT2 229 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 PLXDC1Q8IUK5 500 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 STPG4Q8N801 248 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 OR6C1Q96RD1 312 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 TMEM38BQ9NVV0 291 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 ZFP30Q9Y2G7 519 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 MED12LQ86YW9 2145 aa11.81□□□□□ -0.52
VPS52-212ENST00000445902 TRAV38-1A0A0B4J264 116 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms