RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 MBD1Q9UIS9 605 aaPredicted RBP16.16■□□□□ 0.18
SHANK3-203ENST00000445220 TRIP11Q15643 1979 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 GOSR1O95249 250 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 ROM1Q03395 351 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 SYNGR1O43759 233 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 UPK3AO75631 287 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 DPRXA6NFQ7 191 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 NPBWR2P48146 333 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 PRRX1P54821 245 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 OR1N2Q8NGR9 330 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 OR2Y1Q8NGV0 311 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 TMEM70Q9BUB7 260 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 RBKSQ9H477 322 aa16.16■□□□□ 0.18
SHANK3-203ENST00000445220 CENPVL1A0A0U1RR11 272 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 TMEM250H0YL14 139 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 OR8G5Q8NG78 346 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 NPIPB7O75200 414 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 LCN2P80188 198 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 RASL11BQ9BPW5 248 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 OR2H1Q9GZK4 316 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 PRDM6Q9NQX0 595 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 PLA2G3Q9NZ20 509 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 KIR2DL2P43627 348 aaPredicted RBP16.15■□□□□ 0.18
SHANK3-203ENST00000445220 ZNF841Q6ZN19 808 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 ATOH7Q8N100 152 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 DEFB124Q8NES8 71 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 OTX1P32242 354 aaPredicted RBP16.15■□□□□ 0.18
SHANK3-203ENST00000445220 TM4SF19Q96DZ7 209 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 CDIPTO14735 213 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 HPRT1P00492 218 aa16.15■□□□□ 0.18
SHANK3-203ENST00000445220 LSM10Q969L4 123 aaKnown RBP16.15■□□□□ 0.18
SHANK3-203ENST00000445220 QSER1Q2KHR3 1735 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 ASAH2BP0C7U1 165 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 TMSB15BA0A087X1C1 80 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 A0A0U1RQV5 110 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 ISG15P05161 165 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 PQLC2Q6ZP29 291 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 OR1L8Q8NGR8 309 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 ZNF502Q8TBZ5 544 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 ZCCHC14Q8WYQ9 949 aaKnown RBP16.14■□□□□ 0.17
SHANK3-203ENST00000445220 HIST1H4GQ99525 98 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 KIF13BQ9NQT8 1826 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 TRGV8A0A0C4DH27 118 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 J3QR06 171 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 GNG7O60262 68 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 VENTXO95231 258 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 ZNF708P17019 499 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 NUDT16L1Q9BRJ7 211 aaKnown RBP16.14■□□□□ 0.17
SHANK3-203ENST00000445220 LHX9Q9NQ69 397 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 FZR1Q9UM11 496 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 AMMECR1Q9Y4X0 333 aaPredicted RBP16.14■□□□□ 0.17
SHANK3-203ENST00000445220 TRAV39A0A0B4J263 110 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 A0A1W2PP11 408 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 MMD2Q8IY49 270 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 OR52M1Q8NGK5 317 aa16.14■□□□□ 0.17
SHANK3-203ENST00000445220 A0A087WWC5 75 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 C3orf80F5H4A9 247 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 NFAM1Q8NET5 270 aaPredicted RBP16.13■□□□□ 0.17
SHANK3-203ENST00000445220 NRTNQ99748 197 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 IL36RNQ9UBH0 155 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 AUP1Q9Y679 476 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 MAS1LP35410 378 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 KIAA1644Q3SXP7 199 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 RASL10BQ96S79 203 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 ALKBH7Q9BT30 221 aaPredicted RBP16.13■□□□□ 0.17
SHANK3-203ENST00000445220 TRPM6Q9BX84 2022 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 ARFGEF1Q9Y6D6 1849 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 FAM90A26D6RGX4 464 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 PRNTQ86SH4 94 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 ZNF831Q5JPB2 1677 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 EML2O95834 649 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 SFRP2Q96HF1 295 aa16.13■□□□□ 0.17
SHANK3-203ENST00000445220 LY75O60449 1722 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 TNFAIP6P98066 277 aaPredicted RBP16.12■□□□□ 0.17
SHANK3-203ENST00000445220 C19orf48Q6RUI8 117 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 GFRALQ6UXV0 394 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 OR2J1Q9GZK6 312 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 ASCL3Q9NQ33 180 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 NPTNQ9Y639 398 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 HRKO00198 91 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 SOSTQ9BQB4 213 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 COL4A5P29400 1685 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 RGPD4Q7Z3J3 1758 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 SELENOHQ8IZQ5 122 aaKnown RBP16.12■□□□□ 0.17
SHANK3-203ENST00000445220 SMRP1Q8NCR6 262 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 OR10AG1Q8NH19 301 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 FAM216AQ8WUB2 273 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 GLRX2Q9NS18 164 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 PCM1Q15154 2024 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 Q8WTZ3 238 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 MIEN1Q9BRT3 115 aa16.12■□□□□ 0.17
SHANK3-203ENST00000445220 KLF3P57682 345 aaPredicted RBP16.11■□□□□ 0.17
SHANK3-203ENST00000445220 HOXA4Q00056 320 aaPredicted RBP16.11■□□□□ 0.17
SHANK3-203ENST00000445220 ZP4Q12836 540 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 TWIST1Q15672 202 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 C2orf68Q2NKX9 166 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 HES3Q5TGS1 186 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 OR5R1Q8NH85 324 aa16.11■□□□□ 0.17
SHANK3-203ENST00000445220 GPR146Q96CH1 333 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms